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- Hyphae_segmentation Public
Image quality feature extraction, using them for shallow learning to train 2 different classifiers (good vs. bad images; semi-good vs. good image) to separate images into 3 groups. Use group specific parameters to segment and count hyphae.
NIB-SI/Hyphae_segmentation’s past year of commit activity - syntelogfinder Public
Nextflow pipeline to find syntelogous genes in phased genome assemblies of polyploid plants
NIB-SI/syntelogfinder’s past year of commit activity - Nuclei-segmentation Public
Segmentation of nuclei, chloroplasts or both, and remaining regions. Area, mean intensity, histograms export.
NIB-SI/Nuclei-segmentation’s past year of commit activity
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