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fix: Validate unique antismash BGC/region file names#334

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liannette wants to merge 2 commits intoNPLinker:devfrom
liannette:fix_unique_bgc_ids
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fix: Validate unique antismash BGC/region file names#334
liannette wants to merge 2 commits intoNPLinker:devfrom
liannette:fix_unique_bgc_ids

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Addresses the issue of duplicated BGC gbk file names causing unexpected downstream behavior, as reported in issue
#332

Adds validation logic within the AntismashBGCLoader to ensure that all antismash region .gbk file names are unique across all subdirectories, raising an ValueError when duplicate file names are detected

@liannette liannette marked this pull request as draft March 12, 2026 20:29
@liannette liannette marked this pull request as ready for review March 12, 2026 20:30
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