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correct path name for aviti metadata #433

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Merged
FranBonath merged 2 commits into from
Oct 22, 2025
Merged

correct path name for aviti metadata #433

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ac61e02
correct path name for aviti metadata
FranBonath Oct 21, 2025
cf59ed4
update version log
FranBonath Oct 21, 2025
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4 changes: 4 additions & 0 deletions VERSIONLOG.md
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Original file line number Diff line number Diff line change
@@ -1,5 +1,9 @@
# Scilifelab_epps Version Log

## 20251021.1

Update EPP for parsing Run information to LIMS by correcting the path to the metadata on Preproc.

## 20251013.1

Update EPP for uploading AVITI manifest to manifest processable by TACA.
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2 changes: 1 addition & 1 deletion scripts/aviti_run_parameter_parser.py
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Expand Up @@ -29,7 +29,7 @@ def fetch_fc(process):
def fetch_rundir(fc_id):
run_dir = ""
metadata_dir = "ngi-nas-ns"
data_dir = "AVITI_data"
data_dir = "Aviti_data"
run_dir_path = os.path.join(os.sep, "srv", metadata_dir, data_dir, f"*{fc_id}")
if len(glob.glob(run_dir_path)) == 1:
run_dir = glob.glob(run_dir_path)[0]
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