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@PennLINC

Lifespan Informatics and Neuroimaging Center

The Lifespan Informatics and Neuroimaging Center at the University of Pennylvannia
README.md

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  1. qsiprep qsiprep Public

    Preprocessing of diffusion MRI

    Python 195 64

  2. qsirecon qsirecon Public

    Reconstruction of preprocessed q-space images (dMRI)

    Python 26 17

  3. aslprep aslprep Public

    Preprocessing of arterial spin labeling (ASL) data

    Python 65 22

  4. xcp_d xcp_d Public

    Post-processing of fMRIPrep, NiBabies, and HCP outputs

    Python 120 40

  5. CuBIDS CuBIDS Public

    Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.

    Python 30 13

  6. babs babs Public

    BIDS App Bootstrap (BABS)

    Python 13 8

Repositories

Showing 10 of 245 repositories
  • sypres-docs Public

    Analysis and documentation repo for SYPRES.

    PennLINC/sypres-docs's past year of commit activity
    JavaScript 3 MIT 0 2 6 Updated Nov 6, 2026
  • babs Public

    BIDS App Bootstrap (BABS)

    PennLINC/babs's past year of commit activity
    Python 13 MIT 8 54 7 Updated Nov 5, 2026
  • qsirecon Public

    Reconstruction of preprocessed q-space images (dMRI)

    PennLINC/qsirecon's past year of commit activity
    Python 26 BSD-3-Clause 17 81 7 Updated Nov 5, 2026
  • aslprep Public

    Preprocessing of arterial spin labeling (ASL) data

    PennLINC/aslprep's past year of commit activity
    Python 65 22 39 (2 issues need help) 7 Updated Nov 5, 2026
  • qsiprep Public

    Preprocessing of diffusion MRI

    PennLINC/qsiprep's past year of commit activity
    Python 195 BSD-3-Clause 64 69 3 Updated Nov 4, 2026
  • xcp_d Public

    Post-processing of fMRIPrep, NiBabies, and HCP outputs

    PennLINC/xcp_d's past year of commit activity
    Python 120 BSD-3-Clause 40 35 13 Updated Nov 3, 2026
  • macedo_wm_exposome Public

    We investigated how the childhood exposome, a multidimensional measure capturing total environmental exposures across the lifespan, relates to white matter shape and tissue properties in youth.

    PennLINC/macedo_wm_exposome's past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Nov 2, 2026
  • bdt Public

    BIDS Derivatives Transformer

    PennLINC/bdt's past year of commit activity
    Python 0 Apache-2.0 1 4 4 Updated Nov 1, 2026
  • odx-rs Public
    PennLINC/odx-rs's past year of commit activity
    Rust 1 Apache-2.0 0 0 0 Updated Oct 30, 2026
  • qsiplan Public

    Preprocessing workflow planning for BIDS dMRI data

    PennLINC/qsiplan's past year of commit activity
    Python 1 BSD-3-Clause 1 4 0 Updated Oct 29, 2026
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