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c0cd8eb
feat: add xlsx format; add instrument_field_name matrix reduction
dennisgsmith Nov 19, 2024
0a7e21e
add xlsx to dto struct for binding reuqest bodies
dennisgsmith Nov 19, 2024
e874bc3
move commit to test data insert
dennisgsmith Nov 19, 2024
bc4e289
chore: migrate old survey123 pr to new branch using sqlc
dennisgsmith Nov 19, 2024
1b0db7b
chore: migrate test suite and overrides to sqlc
dennisgsmith Nov 19, 2024
698db39
add tests for new inclinometer schema
dennisgsmith Nov 20, 2024
29e60c2
chore: updatea apidoc to include survey123 payload info
dennisgsmith Nov 20, 2024
6725ec1
fix incorrect time formattings; fix csv uploader BOM and quoting issues
dennisgsmith Nov 20, 2024
de939ff
Merge pull request #245 from USACE/feature/survey123-v2
dennisgsmith Nov 20, 2024
da7b064
feat: allow arbirary timestamp parsing without specified format; list…
dennisgsmith Nov 20, 2024
c3ecb4c
chore: update docs
dennisgsmith Nov 20, 2024
bc0baab
chore: add path to ZONEINFO
dennisgsmith Nov 20, 2024
309d12a
feat: add ability for upload config to specify dat-first preference f…
dennisgsmith Nov 20, 2024
3d0b73b
chore: update docs with parse_day_first uploader config toggle
dennisgsmith Nov 20, 2024
5275f68
fix: use name for slugify func
dennisgsmith Nov 20, 2024
f59e85a
fix: xlsx iterate header
dennisgsmith Nov 20, 2024
3f0ee35
fix: csv parser with inconsistent row lengths for toa5 and dux
dennisgsmith Nov 20, 2024
056207f
chore: account for multiple headers in dux file
dennisgsmith Nov 20, 2024
a44157e
chore: allow timeseries type to be set by client in /timeseries POST
dennisgsmith Nov 20, 2024
233e72b
chore!: remove deprecrated instrument_constants endpoints and tables
dennisgsmith Nov 21, 2024
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2 changes: 2 additions & 0 deletions api/Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -22,6 +22,8 @@ RUN --mount=type=cache,target=/root/.cache/go-build \
FROM ${BASE_IMAGE}
ARG BUILD_TAG
ENV BUILD_TAG=${BUILD_TAG}
ENV ZONEINFO=/usr/share/zoneinfo
COPY --from=builder /usr/share/zoneinfo /usr/share/zoneinfo
COPY --from=builder /go/bin/app /go/bin/app
COPY --from=builder /etc/ssl/certs/ca-certificates.crt /etc/ssl/certs/ca-certificates.crt
ENTRYPOINT ["/go/bin/app"]
15 changes: 11 additions & 4 deletions api/go.mod
Original file line number Diff line number Diff line change
Expand Up @@ -6,6 +6,7 @@ toolchain go1.23.0

require (
github.com/Knetic/govaluate v3.0.1-0.20171022003610-9aa49832a739+incompatible
github.com/araddon/dateparse v0.0.0-20210429162001-6b43995a97de
github.com/aws/aws-lambda-go v1.47.0
github.com/aws/aws-sdk-go-v2 v1.30.5
github.com/aws/aws-sdk-go-v2/config v1.27.33
Expand All @@ -26,8 +27,10 @@ require (
github.com/stretchr/testify v1.9.0
github.com/tidwall/btree v1.7.0
github.com/xeipuuv/gojsonschema v1.2.0
golang.org/x/crypto v0.27.0
github.com/xuri/excelize/v2 v2.9.0
golang.org/x/crypto v0.28.0
golang.org/x/image v0.20.0
golang.org/x/text v0.19.0
)

require (
Expand Down Expand Up @@ -57,16 +60,20 @@ require (
github.com/labstack/gommon v0.4.2 // indirect
github.com/mattn/go-colorable v0.1.13 // indirect
github.com/mattn/go-isatty v0.0.20 // indirect
github.com/mohae/deepcopy v0.0.0-20170929034955-c48cc78d4826 // indirect
github.com/pmezard/go-difflib v1.0.0 // indirect
github.com/richardlehane/mscfb v1.0.4 // indirect
github.com/richardlehane/msoleps v1.0.4 // indirect
github.com/rogpeppe/go-internal v1.11.0 // indirect
github.com/valyala/bytebufferpool v1.0.0 // indirect
github.com/valyala/fasttemplate v1.2.2 // indirect
github.com/xeipuuv/gojsonpointer v0.0.0-20180127040702-4e3ac2762d5f // indirect
github.com/xeipuuv/gojsonreference v0.0.0-20180127040603-bd5ef7bd5415 // indirect
golang.org/x/net v0.29.0 // indirect
github.com/xuri/efp v0.0.0-20240408161823-9ad904a10d6d // indirect
github.com/xuri/nfp v0.0.0-20240318013403-ab9948c2c4a7 // indirect
golang.org/x/net v0.30.0 // indirect
golang.org/x/sync v0.8.0 // indirect
golang.org/x/sys v0.25.0 // indirect
golang.org/x/text v0.18.0 // indirect
golang.org/x/sys v0.26.0 // indirect
golang.org/x/time v0.6.0 // indirect
gopkg.in/yaml.v3 v3.0.1 // indirect
)
34 changes: 26 additions & 8 deletions api/go.sum
Original file line number Diff line number Diff line change
Expand Up @@ -4,6 +4,8 @@ github.com/Knetic/govaluate v3.0.1-0.20171022003610-9aa49832a739+incompatible h1
github.com/Knetic/govaluate v3.0.1-0.20171022003610-9aa49832a739+incompatible/go.mod h1:r7JcOSlj0wfOMncg0iLm8Leh48TZaKVeNIfJntJ2wa0=
github.com/Masterminds/semver/v3 v3.1.1/go.mod h1:VPu/7SZ7ePZ3QOrcuXROw5FAcLl4a0cBrbBpGY/8hQs=
github.com/aead/siphash v1.0.1/go.mod h1:Nywa3cDsYNNK3gaciGTWPwHt0wlpNV15vwmswBAUSII=
github.com/araddon/dateparse v0.0.0-20210429162001-6b43995a97de h1:FxWPpzIjnTlhPwqqXc4/vE0f7GvRjuAsbW+HOIe8KnA=
github.com/araddon/dateparse v0.0.0-20210429162001-6b43995a97de/go.mod h1:DCaWoUhZrYW9p1lxo/cm8EmUOOzAPSEZNGF2DK1dJgw=
github.com/aws/aws-lambda-go v1.47.0 h1:0H8s0vumYx/YKs4sE7YM0ktwL2eWse+kfopsRI1sXVI=
github.com/aws/aws-lambda-go v1.47.0/go.mod h1:dpMpZgvWx5vuQJfBt0zqBha60q7Dd7RfgJv23DymV8A=
github.com/aws/aws-sdk-go-v2 v1.30.5 h1:mWSRTwQAb0aLE17dSzztCVJWI9+cRMgqebndjwDyK0g=
Expand Down Expand Up @@ -178,14 +180,23 @@ github.com/mattn/go-isatty v0.0.12/go.mod h1:cbi8OIDigv2wuxKPP5vlRcQ1OAZbq2CE4Ky
github.com/mattn/go-isatty v0.0.16/go.mod h1:kYGgaQfpe5nmfYZH+SKPsOc2e4SrIfOl2e/yFXSvRLM=
github.com/mattn/go-isatty v0.0.20 h1:xfD0iDuEKnDkl03q4limB+vH+GxLEtL/jb4xVJSWWEY=
github.com/mattn/go-isatty v0.0.20/go.mod h1:W+V8PltTTMOvKvAeJH7IuucS94S2C6jfK/D7dTCTo3Y=
github.com/mattn/go-runewidth v0.0.10/go.mod h1:RAqKPSqVFrSLVXbA8x7dzmKdmGzieGRCM46jaSJTDAk=
github.com/mattn/go-sqlite3 v1.14.22/go.mod h1:Uh1q+B4BYcTPb+yiD3kU8Ct7aC0hY9fxUwlHK0RXw+Y=
github.com/mohae/deepcopy v0.0.0-20170929034955-c48cc78d4826 h1:RWengNIwukTxcDr9M+97sNutRR1RKhG96O6jWumTTnw=
github.com/mohae/deepcopy v0.0.0-20170929034955-c48cc78d4826/go.mod h1:TaXosZuwdSHYgviHp1DAtfrULt5eUgsSMsZf+YrPgl8=
github.com/onsi/ginkgo v1.6.0/go.mod h1:lLunBs/Ym6LB5Z9jYTR76FiuTmxDTDusOGeTQH+WWjE=
github.com/onsi/ginkgo v1.7.0/go.mod h1:lLunBs/Ym6LB5Z9jYTR76FiuTmxDTDusOGeTQH+WWjE=
github.com/onsi/gomega v1.4.3/go.mod h1:ex+gbHU/CVuBBDIJjb2X0qEXbFg53c61hWP/1CpauHY=
github.com/pkg/diff v0.0.0-20210226163009-20ebb0f2a09e/go.mod h1:pJLUxLENpZxwdsKMEsNbx1VGcRFpLqf3715MtcvvzbA=
github.com/pkg/errors v0.8.1/go.mod h1:bwawxfHBFNV+L2hUp1rHADufV3IMtnDRdf1r5NINEl0=
github.com/pmezard/go-difflib v1.0.0 h1:4DBwDE0NGyQoBHbLQYPwSUPoCMWR5BEzIk/f1lZbAQM=
github.com/pmezard/go-difflib v1.0.0/go.mod h1:iKH77koFhYxTK1pcRnkKkqfTogsbg7gZNVY4sRDYZ/4=
github.com/richardlehane/mscfb v1.0.4 h1:WULscsljNPConisD5hR0+OyZjwK46Pfyr6mPu5ZawpM=
github.com/richardlehane/mscfb v1.0.4/go.mod h1:YzVpcZg9czvAuhk9T+a3avCpcFPMUWm7gK3DypaEsUk=
github.com/richardlehane/msoleps v1.0.1/go.mod h1:BWev5JBpU9Ko2WAgmZEuiz4/u3ZYTKbjLycmwiWUfWg=
github.com/richardlehane/msoleps v1.0.4 h1:WuESlvhX3gH2IHcd8UqyCuFY5yiq/GR/yqaSM/9/g00=
github.com/richardlehane/msoleps v1.0.4/go.mod h1:BWev5JBpU9Ko2WAgmZEuiz4/u3ZYTKbjLycmwiWUfWg=
github.com/rivo/uniseg v0.1.0/go.mod h1:J6wj4VEh+S6ZtnVlnTBMWIodfgj8LQOQFoIToxlJtxc=
github.com/rogpeppe/go-internal v1.3.0/go.mod h1:M8bDsm7K2OlrFYOpmOWEs/qY81heoFRclV5y23lUDJ4=
github.com/rogpeppe/go-internal v1.9.0/go.mod h1:WtVeX8xhTBvf0smdhujwtBcq4Qrzq/fJaraNFVN+nFs=
github.com/rogpeppe/go-internal v1.11.0 h1:cWPaGQEPrBb5/AsnsZesgZZ9yb1OQ+GOISoDNXVBh4M=
Expand All @@ -194,6 +205,7 @@ github.com/rs/xid v1.2.1/go.mod h1:+uKXf+4Djp6Md1KODXJxgGQPKngRmWyn10oCKFzNHOQ=
github.com/rs/zerolog v1.13.0/go.mod h1:YbFCdg8HfsridGWAh22vktObvhZbQsZXe4/zB0OKkWU=
github.com/rs/zerolog v1.15.0/go.mod h1:xYTKnLHcpfU2225ny5qZjxnj9NvkumZYjJHlAThCjNc=
github.com/satori/go.uuid v1.2.0/go.mod h1:dA0hQrYB0VpLJoorglMZABFdXlWrHn1NEOzdhQKdks0=
github.com/scylladb/termtables v0.0.0-20191203121021-c4c0b6d42ff4/go.mod h1:C1a7PQSMz9NShzorzCiG2fk9+xuCgLkPeCvMHYR2OWg=
github.com/shopspring/decimal v0.0.0-20180709203117-cd690d0c9e24/go.mod h1:M+9NzErvs504Cn4c5DxATwIqPbtswREoFCre64PpcG4=
github.com/shopspring/decimal v1.2.0/go.mod h1:DKyhrW/HYNuLGql+MJL6WCR6knT2jwCFRcu2hWCYk4o=
github.com/sirupsen/logrus v1.4.1/go.mod h1:ni0Sbl8bgC9z8RoU9G6nDWqqs/fq4eDPysMBDgk/93Q=
Expand Down Expand Up @@ -225,6 +237,12 @@ github.com/xeipuuv/gojsonreference v0.0.0-20180127040603-bd5ef7bd5415 h1:EzJWgHo
github.com/xeipuuv/gojsonreference v0.0.0-20180127040603-bd5ef7bd5415/go.mod h1:GwrjFmJcFw6At/Gs6z4yjiIwzuJ1/+UwLxMQDVQXShQ=
github.com/xeipuuv/gojsonschema v1.2.0 h1:LhYJRs+L4fBtjZUfuSZIKGeVu0QRy8e5Xi7D17UxZ74=
github.com/xeipuuv/gojsonschema v1.2.0/go.mod h1:anYRn/JVcOK2ZgGU+IjEV4nwlhoK5sQluxsYJ78Id3Y=
github.com/xuri/efp v0.0.0-20240408161823-9ad904a10d6d h1:llb0neMWDQe87IzJLS4Ci7psK/lVsjIS2otl+1WyRyY=
github.com/xuri/efp v0.0.0-20240408161823-9ad904a10d6d/go.mod h1:ybY/Jr0T0GTCnYjKqmdwxyxn2BQf2RcQIIvex5QldPI=
github.com/xuri/excelize/v2 v2.9.0 h1:1tgOaEq92IOEumR1/JfYS/eR0KHOCsRv/rYXXh6YJQE=
github.com/xuri/excelize/v2 v2.9.0/go.mod h1:uqey4QBZ9gdMeWApPLdhm9x+9o2lq4iVmjiLfBS5hdE=
github.com/xuri/nfp v0.0.0-20240318013403-ab9948c2c4a7 h1:hPVCafDV85blFTabnqKgNhDCkJX25eik94Si9cTER4A=
github.com/xuri/nfp v0.0.0-20240318013403-ab9948c2c4a7/go.mod h1:WwHg+CVyzlv/TX9xqBFXEZAuxOPxn2k1GNHwG41IIUQ=
github.com/yuin/goldmark v1.4.13/go.mod h1:6yULJ656Px+3vBD8DxQVa3kxgyrAnzto9xy5taEt/CY=
github.com/zenazn/goji v0.9.0/go.mod h1:7S9M489iMyHBNxwZnk9/EHS098H4/F6TATF2mIxtB1Q=
go.uber.org/atomic v1.3.2/go.mod h1:gD2HeocX3+yG+ygLZcrzQJaqmWj9AIm7n08wl/qW/PE=
Expand Down Expand Up @@ -252,8 +270,8 @@ golang.org/x/crypto v0.0.0-20210711020723-a769d52b0f97/go.mod h1:GvvjBRRGRdwPK5y
golang.org/x/crypto v0.0.0-20210921155107-089bfa567519/go.mod h1:GvvjBRRGRdwPK5ydBHafDWAxML/pGHZbMvKqRZ5+Abc=
golang.org/x/crypto v0.19.0/go.mod h1:Iy9bg/ha4yyC70EfRS8jz+B6ybOBKMaSxLj6P6oBDfU=
golang.org/x/crypto v0.20.0/go.mod h1:Xwo95rrVNIoSMx9wa1JroENMToLWn3RNVrTBpLHgZPQ=
golang.org/x/crypto v0.27.0 h1:GXm2NjJrPaiv/h1tb2UH8QfgC/hOf/+z0p6PT8o1w7A=
golang.org/x/crypto v0.27.0/go.mod h1:1Xngt8kV6Dvbssa53Ziq6Eqn0HqbZi5Z6R0ZpwQzt70=
golang.org/x/crypto v0.28.0 h1:GBDwsMXVQi34v5CCYUm2jkJvu4cbtru2U4TN2PSyQnw=
golang.org/x/crypto v0.28.0/go.mod h1:rmgy+3RHxRZMyY0jjAJShp2zgEdOqj2AO7U0pYmeQ7U=
golang.org/x/image v0.20.0 h1:7cVCUjQwfL18gyBJOmYvptfSHS8Fb3YUDtfLIZ7Nbpw=
golang.org/x/image v0.20.0/go.mod h1:0a88To4CYVBAHp5FXJm8o7QbUl37Vd85ply1vyD8auM=
golang.org/x/lint v0.0.0-20190930215403-16217165b5de/go.mod h1:6SW0HCj/g11FgYtHlgUYUwCkIfeOF89ocIRzGO/8vkc=
Expand All @@ -271,8 +289,8 @@ golang.org/x/net v0.0.0-20220722155237-a158d28d115b/go.mod h1:XRhObCWvk6IyKnWLug
golang.org/x/net v0.6.0/go.mod h1:2Tu9+aMcznHK/AK1HMvgo6xiTLG5rD5rZLDS+rp2Bjs=
golang.org/x/net v0.10.0/go.mod h1:0qNGK6F8kojg2nk9dLZ2mShWaEBan6FAoqfSigmmuDg=
golang.org/x/net v0.21.0/go.mod h1:bIjVDfnllIU7BJ2DNgfnXvpSvtn8VRwhlsaeUTyUS44=
golang.org/x/net v0.29.0 h1:5ORfpBpCs4HzDYoodCDBbwHzdR5UrLBZ3sOnUJmFoHo=
golang.org/x/net v0.29.0/go.mod h1:gLkgy8jTGERgjzMic6DS9+SP0ajcu6Xu3Orq/SpETg0=
golang.org/x/net v0.30.0 h1:AcW1SDZMkb8IpzCdQUaIq2sP4sZ4zw+55h6ynffypl4=
golang.org/x/net v0.30.0/go.mod h1:2wGyMJ5iFasEhkwi13ChkO/t1ECNC4X4eBKkVFyYFlU=
golang.org/x/sync v0.0.0-20180314180146-1d60e4601c6f/go.mod h1:RxMgew5VJxzue5/jJTE5uejpjVlOe/izrB70Jof72aM=
golang.org/x/sync v0.0.0-20190423024810-112230192c58/go.mod h1:RxMgew5VJxzue5/jJTE5uejpjVlOe/izrB70Jof72aM=
golang.org/x/sync v0.0.0-20220722155255-886fb9371eb4/go.mod h1:RxMgew5VJxzue5/jJTE5uejpjVlOe/izrB70Jof72aM=
Expand All @@ -299,8 +317,8 @@ golang.org/x/sys v0.5.0/go.mod h1:oPkhp1MJrh7nUepCBck5+mAzfO9JrbApNNgaTdGDITg=
golang.org/x/sys v0.6.0/go.mod h1:oPkhp1MJrh7nUepCBck5+mAzfO9JrbApNNgaTdGDITg=
golang.org/x/sys v0.8.0/go.mod h1:oPkhp1MJrh7nUepCBck5+mAzfO9JrbApNNgaTdGDITg=
golang.org/x/sys v0.17.0/go.mod h1:/VUhepiaJMQUp4+oa/7Zr1D23ma6VTLIYjOOTFZPUcA=
golang.org/x/sys v0.25.0 h1:r+8e+loiHxRqhXVl6ML1nO3l1+oFoWbnlu2Ehimmi34=
golang.org/x/sys v0.25.0/go.mod h1:/VUhepiaJMQUp4+oa/7Zr1D23ma6VTLIYjOOTFZPUcA=
golang.org/x/sys v0.26.0 h1:KHjCJyddX0LoSTb3J+vWpupP9p0oznkqVk/IfjymZbo=
golang.org/x/sys v0.26.0/go.mod h1:/VUhepiaJMQUp4+oa/7Zr1D23ma6VTLIYjOOTFZPUcA=
golang.org/x/term v0.0.0-20201117132131-f5c789dd3221/go.mod h1:Nr5EML6q2oocZ2LXRh80K7BxOlk5/8JxuGnuhpl+muw=
golang.org/x/term v0.0.0-20201126162022-7de9c90e9dd1/go.mod h1:bj7SfCRtBDWHUb9snDiAeCFNEtKQo2Wmx5Cou7ajbmo=
golang.org/x/term v0.0.0-20210927222741-03fcf44c2211/go.mod h1:jbD1KX2456YbFQfuXm/mYQcufACuNUgVhRMnK/tPxf8=
Expand All @@ -316,8 +334,8 @@ golang.org/x/text v0.3.7/go.mod h1:u+2+/6zg+i71rQMx5EYifcz6MCKuco9NR6JIITiCfzQ=
golang.org/x/text v0.7.0/go.mod h1:mrYo+phRRbMaCq/xk9113O4dZlRixOauAjOtrjsXDZ8=
golang.org/x/text v0.9.0/go.mod h1:e1OnstbJyHTd6l/uOt8jFFHp6TRDWZR/bV3emEE/zU8=
golang.org/x/text v0.14.0/go.mod h1:18ZOQIKpY8NJVqYksKHtTdi31H5itFRjB5/qKTNYzSU=
golang.org/x/text v0.18.0 h1:XvMDiNzPAl0jr17s6W9lcaIhGUfUORdGCNsuLmPG224=
golang.org/x/text v0.18.0/go.mod h1:BuEKDfySbSR4drPmRPG/7iBdf8hvFMuRexcpahXilzY=
golang.org/x/text v0.19.0 h1:kTxAhCbGbxhK0IwgSKiMO5awPoDQ0RpfiVYBfK860YM=
golang.org/x/text v0.19.0/go.mod h1:BuEKDfySbSR4drPmRPG/7iBdf8hvFMuRexcpahXilzY=
golang.org/x/time v0.6.0 h1:eTDhh4ZXt5Qf0augr54TN6suAUudPcawVZeIAPU7D4U=
golang.org/x/time v0.6.0/go.mod h1:3BpzKBy/shNhVucY/MWOyx10tF3SFh9QdLuxbVysPQM=
golang.org/x/tools v0.0.0-20180917221912-90fa682c2a6e/go.mod h1:n7NCudcB/nEzxVGmLbDWY5pfWTLqBcC2KZ6jyYvM4mQ=
Expand Down
8 changes: 8 additions & 0 deletions api/internal/config/api.go
Original file line number Diff line number Diff line change
Expand Up @@ -3,6 +3,8 @@ package config
import (
"log"
"os"

"github.com/USACE/instrumentation-api/api/internal/tz"
)

// Config stores configuration information stored in environment variables
Expand Down Expand Up @@ -34,5 +36,11 @@ func NewApiConfig() *ApiConfig {
default:
}

zz, err := tz.ListTimezones("/usr/share/zoneinfo/")
if err != nil {
log.Fatal(err)
}
cfg.AvailableTimezones = zz

return &cfg
}
1 change: 1 addition & 0 deletions api/internal/config/server.go
Original file line number Diff line number Diff line change
Expand Up @@ -12,4 +12,5 @@ type ServerConfig struct {
RequestLoggerEnabled bool `env:"REQUEST_LOGGER_ENABLED"`
RoutePrefix string `env:"ROUTE_PREFIX"`
ServerBaseUrl string `env:"SERVER_BASE_URL"`
AvailableTimezones []string
}
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