predicting auxilin spikes in clathrin-mediated endocytosis

quickstart for making new predictions

download data: download cached data after tracking from this gdrive folder - should be added to the folder data/tracks
process data: run python data.py to properly preprocess all the data (will cache it into the "processed folder")
rerun analysis: notebooks folder contains step-by-step analysis
tests: run tests with pytest in the tests folder

this is a collaboration between the Berkeley Yu-Group and the Berkeley Advanced Bioimaging Center
uses code from several wonderful packages including cmeAnalysis (DanuserLab)

Name		Name	Last commit message	Last commit date
data		data
docs		docs
lib		lib
models		models
notebooks		notebooks
notebooks_snf		notebooks_snf
notebooks_snf_differentiate		notebooks_snf_differentiate
reports		reports
src		src
tests		tests
.gitignore		.gitignore
_config.yml		_config.yml
readme.md		readme.md
requirements.txt		requirements.txt