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This application integrates with Neuroglancer via the CAVEclient library to manage neuroimaging data, allowing users to create, view, and manipulate segment properties in its 3D environment.

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aplbrain/neuroglancer-segment-properties

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Overview: UI for Segment Properties in Neuroglancer

This system is designed to enable users to generate URLs that link to specific segment properties within Neuroglancer, an interactive web-based tool for visualizing 3D image data.

The involves selecting a datastack using CAVEclient and a corresponding table from a dropdown menu, which then triggers a server-side computation to generate a URL that points directly to the configured view in Neuroglancer.

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Setting Up

Installation Upgrade pip and install required packages: python -m pip install --upgrade pip pip install Flask caveclient pandas numpy

Running the Application To start the server and run the application, navigate to the project directory and execute: python app.py

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This application integrates with Neuroglancer via the CAVEclient library to manage neuroimaging data, allowing users to create, view, and manipulate segment properties in its 3D environment.

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