fix: set numpy and deepspeed dependency versions #503
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etowahadams
commented
Nov 13, 2024
| - pytorch-lightning | ||
| - biopython | ||
| - numpy | ||
| - numpy==1.26.4 |
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Currently, numpy is unversioned, causing numpy 2.0+ to be installed which leads to failing tests
etowahadams
commented
Nov 13, 2024
| - pytorch::pytorch-cuda=12.1 | ||
| - pip: | ||
| - deepspeed==0.12.4 | ||
| - deepspeed==0.14.5 |
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Old version causes a module 'deepspeed' has no attribute 'comm' error
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The version of deepspeed specified in environment.yml will lead to a
module 'deepspeed' has no attribute 'comm'error, so we need to upgrade it. The latest numpy version will lead toCould not infer dtype of numpy.int32error, so I downgraded it. This lets all of the tests pass