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arunbodd/README.md

Hi there! I'm Arun Boddapati πŸ‘‹

Lead Scientist | Machine Learning Expert | Bioinformatics Researcher


  • 😊 Pronouns: He/Him
  • πŸŽ“ Education: Dual Master's degrees in Bioinformatics and Biomedical Sciences from Indiana University, USA and Symbiosis University, India
  • πŸ’Ό Experience: 8+ years of expertise in computational biology and bioinformatics
  • πŸ”¬ Current Role: Lead Scientist developing AI-driven solutions for complex biological problems
  • πŸš€ Focus Areas: Multi-Omics, Immunology, Infectious Diseases, Wastewater Surveillance, and Machine Learning applications in Biology
  • 🧠 Currently Learning: GenAI applications to Bioinformatics, LangChain tools & toolkits, and advanced ML for rare diseases
  • πŸ’» Tech Stack: Python, R, Nextflow, AWS, Docker, and exploring AI solution in biology.
  • πŸ† Recent Achievement: Top 8 ranking in WHO's global mock Mpox response (80+ teams worldwide)
  • 🧬 Specialties:
    • Developed Aquascope Nextflow pipeline for SARS-CoV-2 wastewater reporting at CDC
    • Created NexAI: RAG-based tool for nf-core pipeline compliance validation
    • Expertise in single-cell RNA sequencing and metagenomics analysis

πŸ“Š GitHub Analytics

GitHub Stats Β Β Β Β  Top Languages

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πŸ”— Connect With Me

Portfolio Google Scholar LinkedIn Email


πŸ… Career Highlights

  • πŸ”¬ 600+ Citations: Co-Authored several high impact publications that showcases my skills in Bioinformatics/Data Science.
  • 🌊 CDC Pipeline: Developed Aquascope for national wastewater surveillance
  • πŸ€– AI Innovation: Created NexAI RAG tool for pipeline compliance validation
  • 🌍 Global Recognition: Top performer in WHO's international disease surveillance response (Monkey Pox)

Profile Views

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  1. CDCgov/aquascope CDCgov/aquascope Public

    Nextflow 20 14

  2. VCP_NULISA-Seq_Rshiny VCP_NULISA-Seq_Rshiny Public

    R

  3. Portfolio Portfolio Public

    I am a Bioinformatics Scientist by Profession, AI enthusiast by Curiosity and a Technologist by skillset. To know more about me Click the below link

    HTML 1

  4. nf-core_guidelines_validator nf-core_guidelines_validator Public

    A RAG-based AI agent that analyzes Nextflow pipelines for compliance with nf-core guidelines.

    Python