Fix file format identifier for input files in setup instructions #11
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The instructions ask the learner to create a file "chr1-star-index.yaml" that references an input file in the FASTA format, if they are to follow the steps for generating the STAR index themselves. In the YAML file however, the "format" field for that file referred to something else (FASTQ format). If the user followed the instructions and submitted the workflow to Arvados, the run would fail validation. Fixed by using the intended URI for the format (tested in Arvados 2.8.0 dev). Arvados-DCO-1.1-Signed-off-by: Zoë Ma <[email protected]>
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The instructions ask the learner to create a file "chr1-star-index.yaml" that references an input file in the FASTA format, if they are to follow the steps for generating the STAR index themselves.
In the YAML file however, the "format" field for that file referred to something else (FASTQ format). If the user followed the instructions and submitted the workflow to Arvados, the run would fail validation.
Fixed by using the intended URI for the format (tested in Arvados 2.8.0 dev).
Arvados-DCO-1.1-Signed-off-by: Zoë Ma [email protected]
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