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69 changes: 69 additions & 0 deletions datasets/open-targets-platform.yaml
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Name: OpenTargets - Platform
Description: The Open Targets Platform is a comprehensive data integration tool that supports systematic identification and prioritisation of potential therapeutic drug targets. By integrating publicly available datasets including data generated by the Open Targets experimental and informatics research programmes, the Platform provides data and services to assist in the task of therapeutic hypothesis building.
Documentation: https://platform-docs.opentargets.org/
Contact: [email protected]
ManagedBy: Open Targets
UpdateFrequency: The data is release every three months.
Tags:
- drug targets
- drug discovery
- therapeutics
- targets
- diseases
- drugs
- gentropy
- variants
- credible sets
License: https://creativecommons.org/publicdomain/zero/1.0/
Resources:
- Description: OpenTargets Release Data
ARN:
Region:
Type: S3 Bucket
DataAtWork:
Tutorials:
- Title: Autoimmune colocalisations
URL: https://github.com/opentargets/notebooks
NotebookURL: https://github.com/opentargets/notebooks/blob/main/notebooks/autoimmune_colocalisations.ipynb
AuthorName: Open Targets Team
AuthorURL: https://github.com/opentargets
- Title: Autoimmune credible sets
URL: https://github.com/opentargets/notebooks
NotebookURL: https://github.com/opentargets/notebooks/blob/main/notebooks/autoimmune_credible_set.ipynb
AuthorName: Open Targets Team
AuthorURL: https://github.com/opentargets
- Title: ChEMBL Evidence Data Download
URL: https://github.com/opentargets/notebooks
NotebookURL: https://github.com/opentargets/notebooks/blob/main/notebooks/chembl_evidence_download.ipynb
AuthorName: Open Targets Team
AuthorURL: https://github.com/opentargets
- Title: Exploration of Open Targets datasets
URL: https://github.com/opentargets/notebooks
NotebookURL: https://github.com/opentargets/notebooks/blob/main/notebooks/exploring_ot_datasets.ipynb
AuthorName: Open Targets Team
AuthorURL: https://github.com/opentargets
- Title: Open Targets informatics tools
URL: https://www.ebi.ac.uk/training/online/courses/open-targets-quick-tour/
AuthorName: Helena Cornu
AuthorURL: https://www.ebi.ac.uk/people/person/helena-cornu/
- Title: Getting started with the Open Targets Platform GraphQL API
URL: https://www.ebi.ac.uk/training/events/getting-started-open-targets-platform-graphql-api/
AuthorName: Helena Cornu
AuthorURL: https://www.ebi.ac.uk/people/person/helena-cornu/
Tools & Applications:
- Title: Open Targets Platform
URL: https://platform.opentargets.org/
AuthorName: Open Targets
AuthorURL: https://github.com/opentargets/ot-ui-apps
- Title: Open Targets Platform API
URL: https://api.platform.opentargets.org/
AuthorName: Open Targets
AuthorURL: https://github.com/opentargets/platform-api
Publications:
- Title: "Open Targets Platform: facilitating therapeutic hypotheses building in drug discovery"
URL: https://doi.org/10.1093/nar/gkae1128
AuthorName: Annalisa Buniello
AuthorURL: https://orcid.org/0000-0002-4623-8642
DeprecatedNotice:
ADXCategories:
- Healthcare & Life Sciences Data