mummer 3.23 #2034
YoshitakaMobuild-bottles.yml
on: pull_request
Matrix: build-bottles
merge
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Annotations
6 errors and 2 warnings
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`brew linkage --test brewsci/bio/circlator` failed on Linux!:
Formula/circlator.rb#L1
Missing libraries:
libcrypto.so.1.0.0
libpython3.7m.so.1.0
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build-bottles (ubuntu-latest)
brewsci/bio/circlator: failed
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`brew test --retry --verbose brewsci/bio/circlator` failed on Linux!:
Formula/circlator.rb#L73
/home/linuxbrew/.linuxbrew/Homebrew/Library/Homebrew/vendor/portable-ruby/3.3.4_1/bin/bundle clean
==> Testing brewsci/bio/circlator
==> /home/linuxbrew/.linuxbrew/Cellar/circlator/1.5.5/bin/circlator test outdir
/home/linuxbrew/.linuxbrew/Cellar/circlator/1.5.5/libexec/bin/python3.7: error while loading shared libraries: libpython3.7m.so.1.0: cannot open shared object file: No such file or directory
==> Testing brewsci/bio/circlator (again)
==> /home/linuxbrew/.linuxbrew/Cellar/circlator/1.5.5/bin/circlator test outdir
/home/linuxbrew/.linuxbrew/Cellar/circlator/1.5.5/libexec/bin/python3.7: error while loading shared libraries: libpython3.7m.so.1.0: cannot open shared object file: No such file or directory
Error: brewsci/bio/circlator: failed
::error::brewsci/bio/circlator: failed
An exception occurred within a child process:
Minitest::Assertion: Expected: 0
Actual: 127
/home/linuxbrew/.linuxbrew/Homebrew/Library/Homebrew/vendor/bundle/ruby/3.3.0/gems/minitest-5.25.0/lib/minitest/assertions.rb:176:in `assert'
/home/linuxbrew/.linuxbrew/Homebrew/Library/Homebrew/vendor/bundle/ruby/3.3.0/gems/minitest-5.25.0/lib/minitest/assertions.rb:216:in `assert_equal'
/home/linuxbrew/.linuxbrew/Homebrew/Library/Homebrew/formula_assertions.rb:28:in `shell_output'
/home/linuxbrew/.linuxbrew/Homebrew/Library/Homebrew/vendor/bundle/ruby/3.3.0/gems/sorbet-runtime-0.5.11525/lib/types/private/methods/call_validation.rb:270:in `bind_call'
/home/linuxbrew/.linuxbrew/Homebrew/Library/Homebrew/vendor/bundle/ruby/3.3.0/gems/sorbet-runtime-0.5.11525/lib/types/private/methods/call_validation.rb:270:in `validate_call'
/home/linuxbrew/.linuxbrew/Homebrew/Library/Homebrew/vendor/bundle/ruby/3.3.0/gems/sorbet-runtime-0.5.11525/lib/types/private/methods/_methods.rb:277:in `block in _on_method_added'
/home/linuxbrew/.linuxbrew/Homebrew/Library/Taps/brewsci/homebrew-bio/Formula/circlator.rb:75:in `block in <class:Circlator>'
/home/linuxbrew/.linuxbrew/Homebrew/Library/Homebrew/formula.rb:2800:in `block (3 levels) in run_test'
/home/linuxbrew/.linuxbrew/Homebrew/Library/Homebrew/extend/kernel.rb:536:in `with_env'
/home/linuxbrew/.linuxbrew/Homebrew/Library/Homebrew/formula.rb:2799:in `block (2 levels) in run_test'
/home/linuxbrew/.linuxbrew/Homebrew/Library/Homebrew/formula.rb:1193:in `with_logging'
/home/linuxbrew/.linuxbrew/Homebrew/Library/Homebrew/formula.rb:2798:in `block in run_test'
/home/linuxbrew/.linuxbrew/Homebrew/Library/Homebrew/mktemp.rb:75:in `block in run'
/home/linuxbrew/.linuxbrew/Homebrew/Library/Homebrew/mktemp.rb:75:in `chdir'
/home/linuxbrew/.linuxbrew/Homebrew/Library/Homebrew/mktemp.rb:75:in `run'
/home/linuxbrew/.linuxbrew/Homebrew/Library/Homebrew/formula.rb:3109:in `mktemp'
/home/linuxbrew/.linuxbrew/Homebrew/Library/Homebrew/formula.rb:2792:in `run_test'
/home/linuxbrew/.linuxbrew/Homebrew/Library/Homebrew/test.rb:48:in `block in <main>'
/home/linuxbrew/.linuxbrew/Homebrew/Library/Homebrew/vendor/portable-ruby/3.3.4_1/lib/ruby/3.3.0/timeout.rb:186:in `block in timeout'
/home/linuxbrew/.linuxbrew/Homebrew/Library/Homebrew/vendor/portable-ruby/3.3.4_1/lib/ruby/3.3.0/timeout.rb:41:in `handle_timeout'
/home/linuxbrew/.linuxbrew/Homebrew/Library/Homebrew/vendor/portable-ruby/3.3.4_1/lib/ruby/3.3.0/timeout.rb:195:in `timeout'
/home/linuxbrew/.linuxbrew/Homebrew/Library/Homebrew/test.rb:52:in `<main>'
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`brew linkage --test brewsci/bio/iva` failed on Linux!:
Formula/iva.rb#L1
Unwanted system libraries:
/lib/x86_64-linux-gnu/libcrypto.so.1.1
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build-bottles (ubuntu-latest)
Process completed with exit code 1.
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build-bottles (macos-13)
brewsci/bio/circlator: failed
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`brew linkage --test brewsci/bio/circlator` failed on macOS Ventura (13)!:
Formula/circlator.rb#L1
Broken dependencies:
/usr/local/Cellar/circlator/1.5.5/libexec/.Python (circlator)
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`brew test --retry --verbose brewsci/bio/circlator` failed on macOS Ventura (13)!:
Formula/circlator.rb#L73
/usr/local/Homebrew/Library/Homebrew/vendor/portable-ruby/3.3.4_1/bin/bundle clean
==> Testing brewsci/bio/circlator
==> /usr/local/Cellar/circlator/1.5.5/bin/circlator test outdir
dyld[17594]: Library not loaded: @executable_path/../.Python
Referenced from: <14407A17-C783-3A35-80A8-D9A42E77F8C5> /usr/local/Cellar/circlator/1.5.5/libexec/bin/python3.7
Reason: tried: '/usr/local/Cellar/circlator/1.5.5/libexec/.Python' (no such file), '/usr/local/lib/.Python' (no such file), '/usr/lib/.Python' (no such file, not in dyld cache)
==> Testing brewsci/bio/circlator (again)
==> /usr/local/Cellar/circlator/1.5.5/bin/circlator test outdir
dyld[17624]: Library not loaded: @executable_path/../.Python
Referenced from: <14407A17-C783-3A35-80A8-D9A42E77F8C5> /usr/local/Cellar/circlator/1.5.5/libexec/bin/python3.7
Reason: tried: '/usr/local/Cellar/circlator/1.5.5/libexec/.Python' (no such file), '/usr/local/lib/.Python' (no such file), '/usr/lib/.Python' (no such file, not in dyld cache)
Error: brewsci/bio/circlator: failed
::error::brewsci/bio/circlator: failed
An exception occurred within a child process:
Minitest::Assertion: Expected: 0
Actual: nil
/usr/local/Homebrew/Library/Homebrew/vendor/bundle/ruby/3.3.0/gems/minitest-5.25.0/lib/minitest/assertions.rb:176:in `assert'
/usr/local/Homebrew/Library/Homebrew/vendor/bundle/ruby/3.3.0/gems/minitest-5.25.0/lib/minitest/assertions.rb:216:in `assert_equal'
/usr/local/Homebrew/Library/Homebrew/formula_assertions.rb:28:in `shell_output'
/usr/local/Homebrew/Library/Homebrew/vendor/bundle/ruby/3.3.0/gems/sorbet-runtime-0.5.11525/lib/types/private/methods/call_validation.rb:270:in `bind_call'
/usr/local/Homebrew/Library/Homebrew/vendor/bundle/ruby/3.3.0/gems/sorbet-runtime-0.5.11525/lib/types/private/methods/call_validation.rb:270:in `validate_call'
/usr/local/Homebrew/Library/Homebrew/vendor/bundle/ruby/3.3.0/gems/sorbet-runtime-0.5.11525/lib/types/private/methods/_methods.rb:277:in `block in _on_method_added'
/usr/local/Homebrew/Library/Taps/brewsci/homebrew-bio/Formula/circlator.rb:75:in `block in <class:Circlator>'
/usr/local/Homebrew/Library/Homebrew/formula.rb:2800:in `block (3 levels) in run_test'
/usr/local/Homebrew/Library/Homebrew/extend/kernel.rb:536:in `with_env'
/usr/local/Homebrew/Library/Homebrew/formula.rb:2799:in `block (2 levels) in run_test'
/usr/local/Homebrew/Library/Homebrew/formula.rb:1193:in `with_logging'
/usr/local/Homebrew/Library/Homebrew/formula.rb:2798:in `block in run_test'
/usr/local/Homebrew/Library/Homebrew/mktemp.rb:75:in `block in run'
/usr/local/Homebrew/Library/Homebrew/mktemp.rb:75:in `chdir'
/usr/local/Homebrew/Library/Homebrew/mktemp.rb:75:in `run'
/usr/local/Homebrew/Library/Homebrew/formula.rb:3109:in `mktemp'
/usr/local/Homebrew/Library/Homebrew/formula.rb:2792:in `run_test'
/usr/local/Homebrew/Library/Homebrew/test.rb:48:in `block in <main>'
/usr/local/Homebrew/Library/Homebrew/vendor/portable-ruby/3.3.4_1/lib/ruby/3.3.0/timeout.rb:186:in `block in timeout'
/usr/local/Homebrew/Library/Homebrew/vendor/portable-ruby/3.3.4_1/lib/ruby/3.3.0/timeout.rb:41:in `handle_timeout'
/usr/local/Homebrew/Library/Homebrew/vendor/portable-ruby/3.3.4_1/lib/ruby/3.3.0/timeout.rb:195:in `timeout'
/usr/local/Homebrew/Library/Homebrew/test.rb:52:in `<main>'
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Artifacts
Produced during runtime
| Name | Size | |
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bottles-macos-13
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3.21 MB |
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bottles-macos-14
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3.21 MB |
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bottles-ubuntu-latest
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3.24 MB |
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