ENH-SEA021 #5
ENH-SEA021 #5
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| rm -f realtime_rawnc/* | ||
| rm -f L1-timeseries/* | ||
| rm -f L1-profiles/* | ||
| rm -f L2-gridfiles/* |
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Will need to make these all L0 to match the rest of the repo
| long_name: oxygen concentration | ||
| standard_name: mole_concentration_of_dissolved_molecular_oxygen_in_sea_water | ||
| units: umol l-1 | ||
| coordinates: time depth latitude longitude |
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Perhaps swap the units for "unknown" if we're not sure what the oxygen is doing here
| # Make level-1 timeseries netcdf file from th raw files... | ||
| outname = seaexplorer.raw_to_L0timeseries(rawncdir, l0tsdir, deploymentyaml, kind='sub') | ||
| ncprocess.extract_L1timeseries_profiles(outname, profiledir, deploymentyaml) | ||
| outname2 = ncprocess.make_L2_gridfiles(outname, griddir, deploymentyaml) |
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these two lines will need to use extract_L0timeseries_profiles and make_L2_gridfiles respectively
| pldGPCTD = pldGPCTD.drop_vars(arod) | ||
| for vars in [flbbcd, arod]: | ||
| try: | ||
| pldGPCTD = pldGPCTD.drop_vars(vars) |
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This example runs with the changes to pyglider/seaexplorer.py made in #14 which is promising.
I tested the results by compaing the dataset produced by this version of seaexplorer.py and the one in #14 using the xarray equals function they are identical. So we can use either this version or that suggested in #14 no problem. This could also be a handy function for testing purposes
jklymak
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Some changes to make SEA021 work. Don't have correct info in deployment.yml yet, and I have no idea what units the O2 measurements are in, but at least they are processed bu these changes....