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Releases: campanam/vcf2aln

vcf2aln version 0.9.0

16 Aug 02:36
@campanam campanam
v.0.9.0
b5c9907
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vcf2aln version 0.9.0 Pre-release
Pre-release

Major bug fixes
*Sample-specific filters no longer filter whole line
*Completely filtered sites are excluded by the skip option
*Renamed filters to better match standard tags

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vcf2aln version 0.10.0

16 Aug 20:10
@campanam campanam
v.0.10.0
e22369f
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vcf2aln version 0.10.0 Pre-release
Pre-release

*Probabilistic pseudohaplotype calling
*Minimum samples called as a percentage option
*Minimum alignment length to retain parameter

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vcf2aln version 0.8.0

15 Aug 19:13
@campanam campanam
v.0.8.0
25811c6
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vcf2aln version 0.8.0 Pre-release
Pre-release
  • --annotfilter option controls FILTER value filtration
  • --split_regions is now functional
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vcf2aln version 0.7.0

15 Aug 16:00
@campanam campanam
v.0.7.0
ca9e1e2
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vcf2aln version 0.7.0 Pre-release
Pre-release
  • vcf2aln can read uncompressed VCF piped streams
  • Bug fix from --typefields option
Assets 2
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vcf2aln version 0.6.0

03 Apr 16:38
@campanam campanam
v.0.6.0
2aad37a
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vcf2aln version 0.6.0 Pre-release
Pre-release

Can read HaplotypeCaller phased genotypes
Revision to get_GT_flags

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vcf2aln version 0.5.0

03 Apr 14:44
@campanam campanam
v.0.5.0
d9fd655
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vcf2aln version 0.5.0 Pre-release
Pre-release

Massive speed increase due to writing to disk after a specified number of cycles rather than continuously

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vcf2aln version 0.4.2

29 Jun 14:50
@campanam campanam
v.0.4.2
d3d52fc
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vcf2aln version 0.4.2 Pre-release
Pre-release

Bug fix for haploid VCFs

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vcf2aln version 0.4.1

27 Jun 13:45
@campanam campanam
v.0.4.1
f587fd0
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vcf2aln version 0.4.1 Pre-release
Pre-release 
v.0.4.1

Update vcf2aln.rb
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vcf2aln version 0.4.0

21 Jun 18:05
@campanam campanam
v.0.4.0
de30f94
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vcf2aln version 0.4.0 Pre-release
Pre-release 
v.0.4.0

Onehap cat bug
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vcf2aln version 0.3.0

04 Jun 20:21
@campanam campanam
v.0.3.0
136cc49
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vcf2aln version 0.3.0 Pre-release
Pre-release 
v.0.3.0

Cleaned up help screen
Assets 2
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