OceanColor #262
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| name: OceanColor | |
| on: | |
| push: | |
| branches: [ main ] | |
| pull_request: | |
| branches: [ main ] | |
| schedule: | |
| - cron: "7 18 * * 0" | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| max-parallel: 1 | |
| matrix: | |
| python-version: ["3.9", "3.10", "3.11"] | |
| steps: | |
| - name: Install System requirements | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y libhdf5-dev libnetcdf-dev | |
| - uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 0 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Cache pip | |
| uses: actions/cache@v3 | |
| with: | |
| path: ~/.cache/pip | |
| key: ${{ runner.os }}-${{ matrix.python-version }}-pip-${{ hashFiles('**/pyproject.toml') }} | |
| restore-keys: | | |
| ${{ runner.os }}-${{ matrix.python-version }}-pip- | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install flake8 pytest | |
| if [ -f requirements.txt ]; then pip install -r requirements.txt; fi | |
| pip install -e .[dev,parallel,s3] | |
| - name: Cache sample data | |
| id: cache-samples | |
| uses: actions/cache@v3 | |
| with: | |
| path: | | |
| MODIS-Aqua/L3m/2017/01/12/AQUA_MODIS.20170112.L3m.DAY.CHL.chlor_a.4km.nc | |
| MODIS-Aqua/L2/2016/08/31/AQUA_MODIS.20160831T221001.L2.OC.nc | |
| MODIS-Aqua/L2/2016/09/01/AQUA_MODIS.20160901T211500.L2.OC.nc | |
| MODIS-Aqua/L2/2017/01/12/AQUA_MODIS.20170112T213500.L2.OC.nc | |
| MODIS-Terra/L3m/2004/01/06/TERRA_MODIS.20040106.L3m.DAY.CHL.chlor_a.4km.nc | |
| VIIRS-SNPP/L2/2017/01/13/SNPP_VIIRS.20170113T002400.L2.OC.nc | |
| key: ${{ runner.os }}-CHL | |
| - name: Test with pytest | |
| run: | | |
| pytest -v tests | |
| env: | |
| NASA_USERNAME: ${{ secrets.NASA_USERNAME }} | |
| NASA_PASSWORD: ${{ secrets.NASA_PASSWORD }} |