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Update 07.3-concepts.Rmd #243

Update 07.3-concepts.Rmd

Update 07.3-concepts.Rmd #243

Workflow file for this run

# For help debugging build failures open an issue on the RStudio community with the 'github-actions' tag.
# https://community.rstudio.com/new-topic?category=Package%20development&tags=github-actions
on:
push:
branches:
- main
- master
pull_request:
branches:
- main
- master
name: Build and deploy book
jobs:
build:
runs-on: ubuntu-latest
timeout-minutes: 180
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
R_KNITR_OPTIONS: "knitr.chunk.tidy=TRUE"
steps:
- name: Checkout Repo
uses: actions/checkout@v2
- name: Install R
uses: r-lib/actions/setup-r@v2
- name: Configure Java for R
run: |
sudo R CMD javareconf
- name: Install OS dependencies
run: |
sudo apt-get install libcurl4-openssl-dev libharfbuzz-dev libfribidi-dev
- name: Install Pandoc
uses: r-lib/actions/setup-pandoc@v2
with:
pandoc-version: '2.19.2'
- name: Install TinyTeX
uses: r-lib/actions/setup-tinytex@v2
env:
# install full prebuilt version
TINYTEX_INSTALLER: TinyTeX
- name: Query dependencies
run: |
install.packages('remotes')
saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version")
shell: Rscript {0}
- name: Install R dependencies for book
run: |
remotes::install_deps(dependencies = TRUE)
shell: Rscript {0}
- name: Cache R packages
uses: actions/cache@v2
with:
path: ${{ env.R_LIBS_USER }}
key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-
- name: Session info
run: |
options(width = 100)
remotes::install_cran("sessioninfo")
pkgs <- installed.packages()[, "Package"]
sessioninfo::session_info(pkgs, include_base = TRUE)
rmarkdown::find_pandoc()
shell: Rscript {0}
- name: Build HTML, PDF, ebup and mobi
run: sh ./_build.sh
- name: Checkout gh-pages
uses: actions/checkout@v2
with:
ref: gh-pages
path: out
- name: Deploy new book version
run: |
cd out
git rm -rf ./*
cp -r ../manuscript/_book/* ./
mkdir -p .github/workflows/
touch .nojekyll
git add .nojekyll
git add --all ./*
git config --local user.email "[email protected]"
git config --local user.name "Github Action"
git commit -m "Update Book" --allow-empty
git push origin gh-pages
if: ${{ github.event_name == 'push' }}