Iliski is a software aiming to compute Transfer Functions (TFs) between two datasets.
Iliski aims to compute TFs, as described in the pre-print available on BioRxiv.
Iliski requires only a standard computer with enough RAM to support the in-memory operations.
This software has been compiled on Windows 10 Pro (v 18362.295) but should run on any of the Windows 10 or 7 operating systems. It's been developed using Matlab 2018a and the following toolboxes :
- MATLAB
- Global Optimization Toolbox
- Signal Processing Toolbox
- Optimization Toolbox
- Curve Fitting Toolbox
Depending on your Matlab installation, see Installation Guide below. You may need a HDF5 file Viewer, downloadable on the HDF Group website here.
The software is packaged to be used without having Matlab installed on your computer.
- Download here the HDF5 data files (too heavy to be be on GitHub) : http://doi.org/10.5281/zenodo.3773863 and after having installed Iliski, put them in the
ExampleData/folder (where there are already some example files). - Go to the GitHub repository
- Download the repository here and unzip it.
- if you have the Matlab Runtime environnement on your computer, open
Iliski.mlappand have fun! - if you do not have the Matlab Runtime environnement and run
Iliski_WebInstaller.exeto install.- Run the file
Iliski.exeand have fun!
- Run the file
- if you have the Matlab Runtime environnement on your computer, open
Don't forget to install a HDF5 Viewer from here.
The User Manual is in a separate file, at the root of the repository: Iliski_UserManual.pdf.