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Fix line endings. #8

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Fix line endings. #8

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8c65f89
Fix line endings.
markwoon Feb 10, 2016
4191434
Remove obsolete file.
markwoon Feb 10, 2016
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126 changes: 63 additions & 63 deletions tools/KeggConverter/examples/map00031.xml
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Original file line number Diff line number Diff line change
Expand Up @@ -102,61 +102,61 @@
<entry id="22" name="ec:2.2.1.2" type="enzyme" map="3"
link="http://www.genome.jp/dbget-bin/show_pathway?map00030+2.2.1.2"/>
<entry id="23" name="ec:4.1.2.9" type="enzyme" map="3"
link="http://www.genome.jp/dbget-bin/show_pathway?map00030+4.1.2.9"/>
<entry id="24" name="ec:1.2.1.5" type="enzyme" reaction="rn:R04891 rn:R04892"
link="http://www.genome.jp/dbget-bin/www_bget?enzyme+1.2.1.5">
<graphics name="1.2.1.5" fgcolor="#000000" bgcolor="#FFFFFF"
type="rectangle" x="1390" y="531" width="45" height="17"/>
</entry>
<entry id="25" name="ec:2.1.1.6" type="enzyme" reaction="rn:R02534"
link="http://www.genome.jp/dbget-bin/www_bget?enzyme+2.1.1.6">
<graphics name="2.1.1.6" fgcolor="#000000" bgcolor="#FFFFFF"
type="rectangle" x="1206" y="409" width="45" height="17"/>
</entry>
<entry id="187" name="cpd:C05589" type="compound"
link="http://www.genome.jp/dbget-bin/www_bget?compound+C05589">
<graphics name="C05589" fgcolor="#000000" bgcolor="#FFFFFF"
type="circle" x="1271" y="409" width="8" height="8"/>
</entry>
<entry id="190" name="cpd:C05583" type="compound"
link="http://www.genome.jp/dbget-bin/www_bget?compound+C05583">
<graphics name="C05583" fgcolor="#000000" bgcolor="#FFFFFF"
type="circle" x="1390" y="447" width="8" height="8"/>
</entry>
<entry id="30" name="ec:1.4.3.4" type="enzyme" reaction="rn:R04893"
link="http://www.genome.jp/dbget-bin/www_bget?enzyme+1.4.3.4">
<graphics name="1.4.3.4" fgcolor="#000000" bgcolor="#FFFFFF"
type="rectangle" x="1329" y="409" width="45" height="17"/>
</entry>
<entry id="33" name="ec:1.2.1.5" type="enzyme" reaction="rn:R04891 rn:R04892"
link="http://www.genome.jp/dbget-bin/www_bget?enzyme+1.2.1.5">
<graphics name="1.2.1.5" fgcolor="#000000" bgcolor="#FFFFFF"
type="rectangle" x="1390" y="531" width="45" height="17"/>
</entry>
<entry id="186" name="cpd:C00547" type="compound"
link="http://www.genome.jp/dbget-bin/www_bget?compound+C00547">
<graphics name="C00547" fgcolor="#000000" bgcolor="#FFFFFF"
type="circle" x="1156" y="447" width="8" height="8"/>
</entry>
<entry id="32" name="ec:1.14.18.-" type="enzyme" reaction="rn:R06612"
link="http://www.genome.jp/dbget-bin/www_bget?enzyme+1.14.18.-">
<graphics name="1.14.18.-" fgcolor="#000000" bgcolor="#FFFFFF"
type="rectangle" x="1352" y="311" width="45" height="17"/>
</entry>
<entry id="191" name="cpd:C05584" type="compound"
link="http://www.genome.jp/dbget-bin/www_bget?compound+C05584">
<graphics name="C05584" fgcolor="#000000" bgcolor="#FFFFFF"
type="circle" x="1390" y="607" width="8" height="8"/>
</entry>
<entry id="172" name="cpd:C05606" type="compound"
link="http://www.genome.jp/dbget-bin/www_bget?compound+C05606">
<graphics name="C05606" fgcolor="#000000" bgcolor="#FFFFFF"
type="circle" x="1412" y="258" width="8" height="8"/>
</entry>
<entry id="51" name="cpd:C04185" type="compound"
link="http://www.genome.jp/dbget-bin/www_bget?compound+C04185">
<graphics name="C04185" fgcolor="#000000" bgcolor="#FFFFFF"
type="circle" x="1289" y="312" width="8" height="8"/>
link="http://www.genome.jp/dbget-bin/show_pathway?map00030+4.1.2.9"/>
<entry id="24" name="ec:1.2.1.5" type="enzyme" reaction="rn:R04891 rn:R04892"
link="http://www.genome.jp/dbget-bin/www_bget?enzyme+1.2.1.5">
<graphics name="1.2.1.5" fgcolor="#000000" bgcolor="#FFFFFF"
type="rectangle" x="1390" y="531" width="45" height="17"/>
</entry>
<entry id="25" name="ec:2.1.1.6" type="enzyme" reaction="rn:R02534"
link="http://www.genome.jp/dbget-bin/www_bget?enzyme+2.1.1.6">
<graphics name="2.1.1.6" fgcolor="#000000" bgcolor="#FFFFFF"
type="rectangle" x="1206" y="409" width="45" height="17"/>
</entry>
<entry id="187" name="cpd:C05589" type="compound"
link="http://www.genome.jp/dbget-bin/www_bget?compound+C05589">
<graphics name="C05589" fgcolor="#000000" bgcolor="#FFFFFF"
type="circle" x="1271" y="409" width="8" height="8"/>
</entry>
<entry id="190" name="cpd:C05583" type="compound"
link="http://www.genome.jp/dbget-bin/www_bget?compound+C05583">
<graphics name="C05583" fgcolor="#000000" bgcolor="#FFFFFF"
type="circle" x="1390" y="447" width="8" height="8"/>
</entry>
<entry id="30" name="ec:1.4.3.4" type="enzyme" reaction="rn:R04893"
link="http://www.genome.jp/dbget-bin/www_bget?enzyme+1.4.3.4">
<graphics name="1.4.3.4" fgcolor="#000000" bgcolor="#FFFFFF"
type="rectangle" x="1329" y="409" width="45" height="17"/>
</entry>
<entry id="33" name="ec:1.2.1.5" type="enzyme" reaction="rn:R04891 rn:R04892"
link="http://www.genome.jp/dbget-bin/www_bget?enzyme+1.2.1.5">
<graphics name="1.2.1.5" fgcolor="#000000" bgcolor="#FFFFFF"
type="rectangle" x="1390" y="531" width="45" height="17"/>
</entry>
<entry id="186" name="cpd:C00547" type="compound"
link="http://www.genome.jp/dbget-bin/www_bget?compound+C00547">
<graphics name="C00547" fgcolor="#000000" bgcolor="#FFFFFF"
type="circle" x="1156" y="447" width="8" height="8"/>
</entry>
<entry id="32" name="ec:1.14.18.-" type="enzyme" reaction="rn:R06612"
link="http://www.genome.jp/dbget-bin/www_bget?enzyme+1.14.18.-">
<graphics name="1.14.18.-" fgcolor="#000000" bgcolor="#FFFFFF"
type="rectangle" x="1352" y="311" width="45" height="17"/>
</entry>
<entry id="191" name="cpd:C05584" type="compound"
link="http://www.genome.jp/dbget-bin/www_bget?compound+C05584">
<graphics name="C05584" fgcolor="#000000" bgcolor="#FFFFFF"
type="circle" x="1390" y="607" width="8" height="8"/>
</entry>
<entry id="172" name="cpd:C05606" type="compound"
link="http://www.genome.jp/dbget-bin/www_bget?compound+C05606">
<graphics name="C05606" fgcolor="#000000" bgcolor="#FFFFFF"
type="circle" x="1412" y="258" width="8" height="8"/>
</entry>
<entry id="51" name="cpd:C04185" type="compound"
link="http://www.genome.jp/dbget-bin/www_bget?compound+C04185">
<graphics name="C04185" fgcolor="#000000" bgcolor="#FFFFFF"
type="circle" x="1289" y="312" width="8" height="8"/>
</entry>
<relation entry1="19" entry2="20" type="ECrel">
<subtype name="compound" value="13"/>
Expand Down Expand Up @@ -220,13 +220,13 @@
<reaction name="rn:R01183" type="reversible">
<substrate name="cpd:C00137"/>
<product name="cpd:C00691"/>
</reaction>
<reaction name="rn:R04893" type="irreversible">
<substrate name="cpd:C05589"/>
<product name="cpd:C05583"/>
</reaction>
<reaction name="rn:R02534" type="irreversible">
<substrate name="cpd:C00547"/>
<product name="cpd:C05589"/>
</reaction>
<reaction name="rn:R04893" type="irreversible">
<substrate name="cpd:C05589"/>
<product name="cpd:C05583"/>
</reaction>
<reaction name="rn:R02534" type="irreversible">
<substrate name="cpd:C00547"/>
<product name="cpd:C05589"/>
</reaction>
</pathway>
215 changes: 0 additions & 215 deletions tools/PathVisio-tools.iml
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This file was deleted.

2 changes: 1 addition & 1 deletion tools/convert/SciTE.properties
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Original file line number Diff line number Diff line change
@@ -1,2 +1,2 @@
command.build.*.xsd=xmllint $(FileNameExt) -noout -schema XMLSchema.xsd
command.build.*.xsd=xmllint $(FileNameExt) -noout -schema XMLSchema.xsd
command.go.$(file.patterns.perl)=cmd /C perl -w $(FileNameExt) "E:\GenMAPP 2 Data\MAPPs\label_test.mapp" & pause
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