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ENA run accession is not in the MARS receipt #99

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bedroesb opened this issue Jan 17, 2025 · 0 comments
Open

ENA run accession is not in the MARS receipt #99

bedroesb opened this issue Jan 17, 2025 · 0 comments

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@bedroesb
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I don't know if this is because it does not correctly passes the Run information to ENA, or if something goes wrong in the conversion form ENA receipt to MARS receipt.

Result:

{"targetRepository": "ena", "errors": [], "info": [
        {"message": "This submission is a TEST submission and will be discarded within 24 hours"
        }
    ], "accessions": [
        {"value": "ERP168398", "path": [
                {"key": "investigation"
                },
                {"key": "studies", "where": {"key": "title", "value": "Arabidopsis thaliana"
                    }
                }
            ]
        },
        {"value": "ERX13552363", "path": [
                {"key": "investigation"
                },
                {"key": "studies", "where": {"key": "title", "value": "Arabidopsis thaliana"
                    }
                },
                {"key": "assays", "where": {"key": "@id", "value": "#assay/18_20_21"
                    }
                },
                {"key": "materials"
                },
                {"key": "otherMaterials", "where": {"key": "@id", "value": "#other_material/332"
                    }
                }
            ]
        },
        {"value": "ERX13552364", "path": [
                {"key": "investigation"
                },
                {"key": "studies", "where": {"key": "title", "value": "Arabidopsis thaliana"
                    }
                },
                {"key": "assays", "where": {"key": "@id", "value": "#assay/18_20_21"
                    }
                },
                {"key": "materials"
                },
                {"key": "otherMaterials", "where": {"key": "@id", "value": "#other_material/333"
                    }
                }
            ]
        }
    ]
}
@bedroesb bedroesb changed the title ENA run accession is not in the MARS recipt ENA run accession is not in the MARS receipt Jan 17, 2025
@Pedram-A-Keyvani Pedram-A-Keyvani self-assigned this Feb 21, 2025
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