GitHub - evancresswell/DCA_ER_old

Individaul ER simulations:

Jupyter Notebooks: -

Swarm Simulations:

Name		Name	Last commit message	Last commit date
Latest commit History 249 Commits
.ipynb_checkpoints		.ipynb_checkpoints
ER_clean		ER_clean
Resources		Resources
biowulf		biowulf
covid_proteins		covid_proteins
dca_image		dca_image
er_image		er_image
manu		manu
pydca		pydca
tai_ER_code		tai_ER_code
.gitignore		.gitignore
DCA_compare_models.ipynb		DCA_compare_models.ipynb
ERDCA_example.ipynb		ERDCA_example.ipynb
ER_distance_constraint.ipynb		ER_distance_constraint.ipynb
ER_fit_ex.py		ER_fit_ex.py
ER_module_example.ipynb		ER_module_example.ipynb
ER_scratch.py		ER_scratch.py
PCA_to_DCA_simulated.ipynb		PCA_to_DCA_simulated.ipynb
PDB_scratch.ipynb		PDB_scratch.ipynb
README.md		README.md
block_ROC.ipynb		block_ROC.ipynb
check_for_data.py		check_for_data.py
contact_map.py		contact_map.py
data_processing.py		data_processing.py
dca_ER_Sensitivity.ipynb		dca_ER_Sensitivity.ipynb
direct_info.py		direct_info.py
ecc_DCA_ER.ipynb		ecc_DCA_ER.ipynb
ecc_tools.py		ecc_tools.py
expectation_reflection.py		expectation_reflection.py
gplmDCA_asymmetric.py		gplmDCA_asymmetric.py
inference_dca.py		inference_dca.py
plmDCA_pydca.ipynb		plmDCA_pydca.ipynb
simulate_msa.py		simulate_msa.py
test_dca_couple.py		test_dca_couple.py

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