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Releases: flevet/PoCA

0.10.0

11 Nov 09:36

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Corrected a few bugs (crops in 3D could cause PoCA to crash because of an OpenGL instability, Python pre-defined modules were not working, etc.) and added a couple of stuffs like tool tips with histograms.
Added a crop of microtubulles in 3D in the data folder.

0.9.0

02 Nov 15:21

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Modified the way the objects are saved in order to allow correct batch processing.

0.8.0

13 Jun 13:31

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Corrected a bug crashing PoCA when creating 2D objects with DBSCAN.

0.7.0

08 Jun 13:16

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No change with respect to release 0.6.0. This one is done to ensure a proper versioning in Zenodo, as release 0.6.0 was pushed before updating the source code, leading to discrependancies between the archived version 0.6.0 on zeonodo and the correct source code.

0.6.0

08 Jun 13:07

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Correction of a bug that caused PoCA to crash when computing the object colocalization in 2D.
Addition of a new plugin for quantifying the distance between objects identified in 2 colors. More details can be found in the manual and in this publication.

0.5.0

16 Nov 15:25

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0.5.0 Pre-release
Pre-release

Added the possibility to use relative paths with macros.

0.4.0

28 Jul 10:46

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0.4.0 Pre-release
Pre-release

Update 22/09/13: Added python37.dll to the package

This pre-release correct a set of different bugs. Among other, PoCA displaying of ROIs and picking information should work correctly on laptop now. If Cuda is not installed on the computer, rotating a 3D dataset or trying executing the 3D Voronoi creation should not crash PoCA anymore. Also corrected a bug on Coloc-Tesseler with 2D datasets that resulted in a wrong normalisation of the data.

0.3.0

09 Feb 10:07

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0.3.0 Pre-release
Pre-release

Third pre-release to celebrate pushing the source code of PoCA. In addition to solving several small bugs, it corrects a major bug that was happening when density segmenting with the 2D Voronoi diagram. This bug was related to a false computation of the polygon area, resulting in a false computation of the density and weird behaviors for segmentation.

If upon executing poca.exe Windows asks for dlls such as "VCRUNTIME140_1.dll", you may need to install the "microsoft visual c++ 2019 redistributable package (x64)": https://docs.microsoft.com/en-GB/cpp/windows/latest-supported-vc-redist?view=msvc-160

For having access to the Voronoi 3D construction, you will need an NVidia card with the latest drivers installed as well as CUDA (10.2 for instance, may work with newest versions): https://developer.nvidia.com/cuda-10.2-download-archive

0.2.0

28 Oct 13:09
b718327

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0.2.0 Pre-release
Pre-release

Second pre-release. This is done for the Mifobio 2021 workshop I will animate. Several important changes since the initial pre-release.

  • Addition of a dialog when opening a csv files. This dialog pre-visualize the file and allows to select the columns to load and assign them to some categories (x, y, z, frame, etc.).
  • Addition of several new visualizations and OpenGL options. Some of the OpenGL bugs from the initial release have been resolved. Nevertheless, you could still experienced some crashes of the rendering engine. Usually, forcing redraw of the window resolves part of the problem (still, at least rendering of one feature such as the Voronoi stays broken)
  • In the Voronoi tab, the "Characteristics" section is still under development.
  • Objects statistics can be saved.
  • 3D crops have been added.
  • Coloc-Tesseler should be a lot faster when compared to the initial release.

Missing:

  • The manual is still very preliminary and has not been updated since the initial release.
  • The Macro tab is still under development.

If upon executing poca.exe Windows asks for dlls such as "VCRUNTIME140_1.dll", you may need to install the "microsoft visual c++ 2019 redistributable package (x64)": https://docs.microsoft.com/en-GB/cpp/windows/latest-supported-vc-redist?view=msvc-160

For having access to the Voronoi 3D construction, you will need an NVidia card with the latest drivers installed as well as CUDA (10.2 for instance, may work with newest versions): https://developer.nvidia.com/cuda-10.2-download-archive

Data for the Mifobio 2021 workshop: https://www.dropbox.com/s/wd7cb6wjqop8d3i/Mifobio2021.zip?dl=0

0.1.0

30 Nov 22:55
34714ab

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0.1.0 Pre-release
Pre-release

Initial pre-release. This is done for the I2K tutorial: PoCA has still a substancial number of bugs and is missing some key features. Nevertheles, it is still more interesting to use it than the SR-Tesseler release.