jknightlab
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SepstratifieR
SepstratifieR PublicStratification of infectious disease patients by gene expression profile
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TAPS-pipeline
TAPS-pipeline PublicCodes for processing of methylation data generated using the TAPS method
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impute-tools
impute-tools PublicScripts to facilitate imputation of genotypes and subsequent QC.
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mirna_pipeline
mirna_pipeline Publicbioinformatics pipeline to analyze micro RNA sequencing data
Repositories
- Enhancer-RNA Public
jknightlab/Enhancer-RNA’s past year of commit activity - MTOR-Genetics-Project Public
jknightlab/MTOR-Genetics-Project’s past year of commit activity - DESeq2-Tutorial Public
jknightlab/DESeq2-Tutorial’s past year of commit activity - ONT-methylation-pipeline Public
Codes used for analysing sequencing data and modified base information derived using ONT
jknightlab/ONT-methylation-pipeline’s past year of commit activity - ICeCAP Public Forked from gabriele2017/ICeCAP
Fork of Gabriele's ICeCAP pipeline for reference in the jknightlab GitHub
jknightlab/ICeCAP’s past year of commit activity - Sample-identity-CHECK Public
jknightlab/Sample-identity-CHECK’s past year of commit activity - SepstratifieR-paper_Sci-Trans-Med_2022 Public
This repository contains all the codes associated with the paper "An immune dysfunction score for stratification of patients with acute infection based on whole blood gene expression" by Cano-Gamez et al.
jknightlab/SepstratifieR-paper_Sci-Trans-Med_2022’s past year of commit activity
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