To adapt recount-pump to a new HPC system:
- Make a subdirectory
- Install miniconda and some python packages:
(install miniconda)
conda config --add channels conda-forge
conda install watchtower docopt pytest psutil sqlalchemy psycopg2 awscli
- Install
globus_sdkpython module, which is only available viapip:
pip install globus_sdk
- You'll need your
~./aws/credentialsfile populated for any AWS profiles you refer to in the configs - Thins you may need to add to your
bashprofile:- Adding
condato thePATH module load singularity- Set
SINGULARITY_CACHEDIR
- Adding
- In
projects/common/clusters/stampede2