GWAS meta-analysis pipeline

1 - Quick Start

nextflow run main.nf --studies https://lifebit-featured-datasets.s3-eu-west-1.amazonaws.com/pipelines/metagwas/list-summary-statistics.csv

See usage docs for all of the available options when running the pipeline.

2 - Important assumptions

This pipeline currently assumes all the studies are formatted as SAIGE output files.