BMI260 class final project: Liver Cancer Segmentation on Histopathology Images

Usage:

Download the repo

python ./main.py

Name		Name	Last commit message	Last commit date
Latest commit History 30 Commits
color_jittering_images		color_jittering_images
data/membrane		data/membrane
img		img
trained_models		trained_models
.gitignore		.gitignore
LICENSE		LICENSE
Liver Cancer Segmentation Slides.pdf		Liver Cancer Segmentation Slides.pdf
Lung3D.md		Lung3D.md
Merged_BMI260 2019 Problem Set 1.ipynb		Merged_BMI260 2019 Problem Set 1.ipynb
Merged_BMI260 2019 Problem Set 1.pdf		Merged_BMI260 2019 Problem Set 1.pdf
README.md		README.md
a.png		a.png
data.py		data.py
dataPrepare.ipynb		dataPrepare.ipynb
finalmodel_accuracy.png		finalmodel_accuracy.png
main.py		main.py
model.py		model.py
model_10.py		model_10.py
model_6.py		model_6.py
scan_0.png		scan_0.png
scan_1.png		scan_1.png
slices.png		slices.png
test.py		test.py
trainUnet.ipynb		trainUnet.ipynb
unet_membrane_6_layers.h5		unet_membrane_6_layers.h5
unet_membrane_6_layers_saved.h5		unet_membrane_6_layers_saved.h5