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Update forked repo
This is very coarse, I know
fix: updated mdv to idv
Add parsers for input of reactions into INCA from excel or csv-files in the format of - data_stage02_isotopomer_modelReactions - data_stage02_isotopmer_atomMappingReactions2 - data_stage02_isotopomer_atomMappingMetabolites
feat: create folder for parsers and add INCA reaction parser
Update README.md
Changed MATLAB code generator to work with INCA 2.0
The previous code could not handle reactions with 3 copies of the same compound. The code was refactored to handle with and moved a function to ease testing. Unit tests for for the function implemented in a new test file.
Before the filepaths were specific to one computer. There are two changes - The data filepath are now relative. - The path to the matlab directory was moved an environment vairable using the dotenv package.
refactor: combine_duplicated_compounds
Generalises handling of filepaths.
Simple test model - test for writing matlab scripts
viktorht
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May 11, 2024
Describes how to modify options through the INCAWrapper in the docs.
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