Skip to content
@monarch-initiative

Monarch Initiative

Cross-species disease discovery and diagnosis

Pinned Loading

  1. mondo mondo Public template

    Mondo Disease Ontology

    Jupyter Notebook 245 56

  2. koza koza Public

    Data transformation framework for LinkML data models

    Python 49 4

  3. MAxO MAxO Public

    Medical action ontology

    HTML 55 4

  4. helpdesk helpdesk Public

    The Monarch Initiative Helpdesk

    7

  5. monarch-ingest monarch-ingest Public

    Data ingest application for Monarch Initiative knowledge graph using Koza

    Python 15 3

  6. monarch-app monarch-app Public

    Monarch Initiative website and API

    Python 22 6

Repositories

Showing 10 of 250 repositories
  • monarch-phenologs Public
    monarch-initiative/monarch-phenologs’s past year of commit activity
    Python 3 BSD-3-Clause 0 14 0 Updated Mar 17, 2025
  • mondo Public template

    Mondo Disease Ontology

    monarch-initiative/mondo’s past year of commit activity
    Jupyter Notebook 245 CC-BY-4.0 56 384 (2 issues need help) 66 Updated Mar 17, 2025
  • medgen Public

    MedGen ingest.

    monarch-initiative/medgen’s past year of commit activity
    Python 1 0 9 0 Updated Mar 16, 2025
  • omim Public

    Data ingest pipeline for OMIM.

    monarch-initiative/omim’s past year of commit activity
    Jupyter Notebook 7 3 68 4 Updated Mar 16, 2025
  • aurelian Public

    A motley crew of agents developed by the Monarch Initiative

    monarch-initiative/aurelian’s past year of commit activity
    Python 4 MIT 0 4 1 Updated Mar 15, 2025
  • graph-agent-devops Public

    Working directory for reusable "simple" devops for the graph agent

    monarch-initiative/graph-agent-devops’s past year of commit activity
    HCL 0 BSD-3-Clause 0 5 0 Updated Mar 14, 2025
  • mondo-ingest Public

    Coordinating the mondo-ingest with external sources

    monarch-initiative/mondo-ingest’s past year of commit activity
    Jupyter Notebook 7 3 237 (1 issue needs help) 6 Updated Mar 14, 2025
  • phenopacket2prompt Public

    GA4GH Phenopacket to LLM prompt

    monarch-initiative/phenopacket2prompt’s past year of commit activity
    Java 4 MIT 2 4 1 Updated Mar 14, 2025
  • ontotools-docker Public Forked from EBISPOT/ontotools-docker

    Configuration to deploy ontotools using docker compose

    monarch-initiative/ontotools-docker’s past year of commit activity
    Shell 1 Apache-2.0 10 2 1 Updated Mar 13, 2025
  • upheno-cross-species-ingest Public
    monarch-initiative/upheno-cross-species-ingest’s past year of commit activity
    Python 0 BSD-3-Clause 0 0 0 Updated Mar 13, 2025
View all repositories

Top languages

Loading…