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Workaround for overflow error mentioned in issue #20 #23

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@leetaiyi leetaiyi commented Nov 8, 2023

If detected that the product of the sizes of df and gr_bam are over 2^31, will subset them both to avoid the overflow error. Will cause in a few lost edgecases near where the divisions are though. Now works on the cases where it failed due to this error.

Added a workaround for large intersections of df and gr_bam by splitting both into subsets based on how many more factors of 2 the product of the subset of (chr,strand) was over 2^31. Will be missing a few cases in the splits but is a reasonable workaround for now.

Included a hardcoding for nb_cpus=8
Added missing numpy import
Because Pyranges documented it was available but never implemented it >:(
Cleaned the `n$m` format to just output `n`. This is a very space-inefficient workaround, but do not know the pyranges class well enough to find a better way.
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