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Upgrade dependencies + upgrade Python version (#237)
## Ticket ## Changes Upgraded python version from 3.12 to 3.13 Upgraded many package versions of other dependencies ## Context for reviewers This should be uneventful, the upgrade from Python 3.12 -> 3.13 had very little that would be breaking (many of the major changes need to be enabled explicitly). The package versions are just catching up on updates - we've been doing a better job of this in the simpler grants repo. There are several vulnerabilities this should fix. https://github.com/navapbc/template-application-flask/security/dependabot
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