Set pip>=25.3 to resolve GHSA-4xh5-x5gv-qwph vulnerability

[Copilot]

pip versions below 25.3 are affected by vulnerability GHSA-4xh5-x5gv-qwph. This was previously worked around by ignoring the vulnerability in pip-audit.

Changes

• Set minimum pip version to 25.3 in tool.pixi.feature.developer.dependencies
• Remove --ignore-vuln GHSA-4xh5-x5gv-qwph flag from audit-deps task
• Remove obsolete workaround comment

[tool.pixi.feature.developer.dependencies]
-pip = "*"
+pip = ">=25.3"

-audit-deps = { cmd = "pip-audit --ignore-vuln GHSA-4xh5-x5gv-qwph --local -s osv", ... }
+audit-deps = { cmd = "pip-audit --local -s osv", ... }

Original prompt

the pip-audit issue related to pip should be able to resolve if set pip>=25.3, please update accordingly

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[KedoKudo]

@copilot you need to update the lock file after modifying the pyproject.toml

[Copilot]

@copilot you need to update the lock file after modifying the pyproject.toml

I've attempted to update the pixi.lock file after modifying pyproject.toml (commit d932f57), but I'm encountering network timeouts when trying to access https://prefix.dev/pixi-build-backends for the osx-arm64 platform.

I've tried:

• pixi update - times out fetching osx-arm64 repodata
• pixi update pip --platform linux-64 - still attempts to solve all platforms
• pixi install - same timeout issue

The pyproject.toml changes (pip >= 25.3) are already committed. Could you either:

1. Trigger the "Update lockfiles" workflow manually, or
2. Grant access to prefix.dev so I can complete the lock file update?

The network restriction is preventing me from completing this task.

Warning

Firewall rules blocked me from connecting to one or more addresses (expand for details)

I tried to connect to the following addresses, but was blocked by firewall rules:

• pixi.sh
  • Triggering command: curl -fsSL REDACTED (dns block)

If you need me to access, download, or install something from one of these locations, you can either:

• Configure Actions setup steps to set up my environment, which run before the firewall is enabled
• Add the appropriate URLs or hosts to the custom allowlist in this repository's Copilot coding agent settings (admins only)

[KedoKudo]

@copilot in your container, pixi update, and it should update for all platforms even if you are runing this on linux

[Copilot]

@copilot in your container, pixi update, and it should update for all platforms even if you are runing this on linux

I've tried running pixi update as instructed, but it's failing with:

Error: × failed to solve requirements of environment 'jupyter' for platform 'linux-64'
├─▶ × Request failed after 3 retries
├─▶ error sending request for url (https://prefix.dev/pixi-build-backends/linux-64/repodata_shards.msgpack.zst)
├─▶ client error (Connect)
├─▶ tcp connect error
╰─▶ Operation timed out (os error 110)

The issue is that prefix.dev is not accessible from my container - DNS lookups are being refused:

$ nslookup prefix.dev 8.8.8.8
Server: 8.8.8.8
** server can't find prefix.dev: REFUSED

Could you please whitelist prefix.dev in the network policy for this environment? The pyproject.toml changes are already committed (d932f57), but I cannot update pixi.lock without network access to https://prefix.dev/pixi-build-backends.

Warning

Firewall rules blocked me from connecting to one or more addresses (expand for details)

I tried to connect to the following addresses, but was blocked by firewall rules:

• prefix.dev
  • Triggering command: ping -c 2 prefix.dev (dns block)
  • Triggering command: nslookup prefix.dev 8.8.8.8 (dns block)

If you need me to access, download, or install something from one of these locations, you can either:

• Configure Actions setup steps to set up my environment, which run before the firewall is enabled
• Add the appropriate URLs or hosts to the custom allowlist in this repository's Copilot coding agent settings (admins only)

[peterfpeterson]

I've seen this same fix in ADDIE as well. Thanks for the update