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Pull requests: nf-core/fetchngs

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Pull requests list

AWS mirrored SRA file download
#355 opened Aug 15, 2025 by tanaes Loading…
6 of 11 tasks
Add fastq-dl as download method
#353 opened Aug 3, 2025 by camlloyd • Draft
11 tasks
@camlloyd
1
Proposal: nf-core-utils
#348 opened May 18, 2025 by edmundmiller Loading…
5 tasks
1.13.0
@edmundmiller
7
Update to Nextflow 25.04
#347 opened May 14, 2025 by bentsherman Loading… 1.13.0
2
Patch wget failure to download
#338 opened Feb 26, 2025 by ukleiner Loading…
4 tasks done
1.13.0
1
Proposal: Rewrite SRA_RUNINFO_TO_FTP as native process
#337 opened Feb 21, 2025 by bentsherman Loading… 1.13.0
2
Add wget wait time for retries
#325 opened Nov 29, 2024 by maxibor Loading…
1 of 6 tasks
1.13.0
2
Add ampliseq samplesheet creation dependent on #790 in ampliseq
#324 opened Oct 29, 2024 by jenmuell • Draft
2 of 11 tasks
1.13.0
@jenmuell
1
Proposal: Static types
#309 opened May 1, 2024 by bentsherman • Draft 1.14.0
106
Cloud tests switched to using a matrix strategy
#289 opened Feb 22, 2024 by adamrtalbot • Draft
10 tasks
1.13.0
2
optimized resources
#269 opened Feb 6, 2024 by edmundmiller • Draft 1.13.0
3
@edmundmiller
4
Implement ffq
#100 opened Jun 30, 2022 by drpatelh • Draft 1.14.0
2
ProTip! Updated in the last three days: updated:>2025-08-18.