Skip to content

Issues: nf-core/modules

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

477 Open 1,606 Closed
477 Open 1,606 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

new module: TOOL/SUBTOOL plink-PCA new module Adding a new module
#7799 opened Mar 14, 2025 by bruno-ariano
4 tasks done
@bruno-ariano
new module: gwas2vcf/convert new module Adding a new module
#7798 opened Mar 14, 2025 by edg1983
4 tasks done
@edg1983
new subworkflow: MHC_BINDING_PREDICTION new subworkflow
#7797 opened Mar 14, 2025 by jonasscheid
4 tasks done
@jonasscheid
1
Inputs copied to work directory from scratch directory in GATK4SPARK_APPLYBQSR bug Something isn't working
#7792 opened Mar 13, 2025 by johnoooh
2 tasks done
@johnoooh
new module: BEDTOOLS/RANDOM new module Adding a new module
#7786 opened Mar 12, 2025 by itrujnara
4 tasks done
@itrujnara
new module: BEDTOOLS/SHUFFLE new module Adding a new module
#7785 opened Mar 12, 2025 by itrujnara
4 tasks done
1
@itrujnara
Linting fails for module with Dockerfile bug Something isn't working
#7781 opened Mar 12, 2025 by fasterius
2 tasks done
1
new module: MATLOCK/BAM2JUICER new module Adding a new module
#7778 opened Mar 11, 2025 by GallVp
4 tasks done
@GallVp
ilastik/multicut test failing - needs migration to nf-test bug Something isn't working
#7774 opened Mar 11, 2025 by mirpedrol
2 tasks done
Test names in freebayes test do not fit the used test data good first issue Good for newcomers nf-test
#7766 opened Mar 10, 2025 by famosab
nf-test migration: vrhyme/extractunbinned
#7716 opened Feb 28, 2025 by LouisLeNezet
2
nf-test migration: varlociraptor/callvariants
#7715 opened Feb 28, 2025 by LouisLeNezet
nf-test migration: universc
#7714 opened Feb 28, 2025 by LouisLeNezet
nf-test migration: ultra/index
#7713 opened Feb 28, 2025 by LouisLeNezet
nf-test migration: ultra/align
#7712 opened Feb 28, 2025 by LouisLeNezet
nf-test migration: ucsc/bedtobigbed
#7711 opened Feb 28, 2025 by LouisLeNezet
nf-test migration: topas/gencons
#7709 opened Feb 28, 2025 by LouisLeNezet
nf-test migration: svtk/standardize
#7707 opened Feb 28, 2025 by LouisLeNezet
1
@kubranarci
nf-test migration: svtk/rdtest2vcf
#7706 opened Feb 28, 2025 by LouisLeNezet
nf-test migration: svtk/baftest
#7705 opened Feb 28, 2025 by LouisLeNezet
nf-test migration: svaba
#7704 opened Feb 28, 2025 by LouisLeNezet
nf-test migration: survivor/simsv
#7703 opened Feb 28, 2025 by LouisLeNezet
nf-test migration: survivor/filter
#7702 opened Feb 28, 2025 by LouisLeNezet
nf-test migration: stecfinder
#7701 opened Feb 28, 2025 by LouisLeNezet
nf-test migration: srst2/srst2
#7700 opened Feb 28, 2025 by LouisLeNezet
ProTip! no:milestone will show everything without a milestone.