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1. czbiohub-sf/scrnaseq-for-the-99-percent czbiohub-sf/scrnaseq-for-the-99-percent Public archive

   Code accompanying the paper titled, "Single-cell transcriptomics for the 99.9% of species without reference genomes" by Botvinnik et al, 2021

   Jupyter Notebook 5 2

2. mwaskom/seaborn mwaskom/seaborn Public

   Statistical data visualization in Python

   Python 12.6k 1.9k

3. prettyplotlib prettyplotlib Public

   Painlessly create beautiful matplotlib plots.

   Python 1.7k 148

4. czbiohub-sf/orpheum czbiohub-sf/orpheum Public archive

   Orpheum (Previously called and published under sencha) is a Python package for directly translating RNA-seq reads into coding protein sequence.

   Python 18 4

5. nf-core/kmermaid nf-core/kmermaid Public archive

   k-mer similarity analysis pipeline

   Nextflow 19 11

6. dissertation dissertation Public

   Computational analysis of single-cell alternative splicing: A dissertation submitted in partial satisfaction of the requirements for the degree Doctor of Philosophy in Bioinformatics and Systems Bi…

   TeX 5 1