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    12 repositories

    • CATMAID

      Public
      Collaborative Annotation Toolkit for Massive Amounts of Image Data
      image-annotationneurosciencenetwork-analysis
      image-annotationneurosciencenetwork-analysisconnectomics
      JavaScript
      •
      GNU General Public License v3.0
      •59•201•406•12•Updated Jul 1, 2026Jul 1, 2026

    • catmaid-docker

      Public
      Docker compose application for CATMAID
      Shell
      •3•0•2•0•Updated May 28, 2026May 28, 2026

    • tileserver

      Public
      A tile server for CATMAID using TensorStore
      Python
      •0•1•0•0•Updated Jan 21, 2025Jan 21, 2025

    • rust-pyn5

      Public
      Wrap rust-n5 functionality in a python importable library
      Python
      •
      MIT License
      •7•0•0•0•Updated Oct 1, 2024Oct 1, 2024

    • catpy

      Public
      Python client for the CATMAID API
      image-annotationneuroscienceconnectomics
      image-annotationneuroscienceconnectomics
      Python
      •
      MIT License
      •3•4•10•6•Updated Dec 26, 2022Dec 26, 2022

    • circuitmap

      Public
      Django application serving data for synapse-guided circuit mapping in CATMAID
      Python
      •
      GNU General Public License v3.0
      •2•2•0•0•Updated Feb 2, 2021Feb 2, 2021

    • catmaid-standalone

      Public
      A regular Docker image that uses the CATMAID base image and sets up PostgreSQL and Nginx.
      Dockerfile
      •
      GNU General Public License v3.0
      •1•1•1•0•Updated Jan 12, 2021Jan 12, 2021

    • catmaidsynister

      Public
      Neurotransmitter lookup for connectors.
      Python
      •0•1•0•0•Updated May 12, 2020May 12, 2020

    • catmaid-tools

      Public
      Utilities for CATMAID, mostly ImgLib2 based
      Java
      •4•5•0•1•Updated Nov 16, 2017Nov 16, 2017

    • catmaid.github.io

      Public
      Documentation for CATMAID
      HTML
      •0•0•0•0•Updated Nov 11, 2016Nov 11, 2016

    • CATMAID-to-Blender

      Public
      This is a copy of CATMAID-to-Blender, a Blender plugin to interface with CATMAID Server and Pull Data. Have a look at the upstream repository for the latest cha…
      Python
      •
      GNU General Public License v3.0
      •13•2•0•0•Updated Mar 24, 2016Mar 24, 2016

    • legacy

      Public
      Legacy tools, utilities and files related to CATMAID
      C++
      •0•0•0•0•Updated Dec 15, 2015Dec 15, 2015
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