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    4 repositories

    • cytotrace2

      Public
      CytoTRACE 2 is an interpretable AI method for predicting cellular potency and absolute developmental potential from scRNA-seq data.
      R
      •
      Other
      •23•239•2•1•Updated Mar 17, 2026Mar 17, 2026

    • spatialecotyper

      Public
      Deciphering spatial ecotypes from spatial, single-cell, and bulk transcriptomic data
      R
      •
      Other
      •0•1•0•0•Updated Jan 21, 2026Jan 21, 2026

    • cytospace

      Public
      CytoSPACE: Optimal mapping of scRNA-seq data to spatial transcriptomics data
      Python
      •
      Other
      •20•139•9•0•Updated Feb 20, 2025Feb 20, 2025

    • ecotyper

      Public
      EcoTyper is a machine learning framework for large-scale identification of cell states and cellular ecosystems from gene expression data.
      tumorsingle-celldeconvolution
      tumorsingle-celldeconvolutionbulk-rna-seqmicroenvironment
      R
      •
      Other
      •43•236•13•0•Updated Mar 28, 2024Mar 28, 2024
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