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Pull requests: oschwengers/bakta

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Pull requests list

perf(predict_t_rnas): chunk the input across tRNAscan-SE processes #289
#451 opened Aug 18, 2026 by piotrkica Contributor Loading…
1
reduce time complexity in get_adjacent_genes enhancement New feature or request
#449 opened Aug 15, 2026 by piotrkica Contributor Loading…
@oschwengers
1
Add AMRFinder DB version logging and --amrfinder-db argument
#438 opened Apr 4, 2026 by whatever60 Loading…
Make AMRFinderPlus failure non-fatal
#429 opened Feb 21, 2026 by rec3141 Loading…
3 tasks done
1
Exposed Diamond block size as Bakta parameter & resolved None type error within features/cds.py
#415 opened Jan 8, 2026 by spyridon-ntokos Loading…
Add sORFdb for sorf annotation
#383 opened Jul 11, 2025 by jhahnfeld Contributor Loading…
add scripts/make-user-region-GFFs.py
#260 opened Nov 21, 2023 by marade Loading…
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