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Scientist in the making!
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Scientist in the making!

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pritampanda15/README.md

Pritam Kumar Panda

Bioinformatician | AI-Driven Drug Discovery Specialist | Stanford Postdoctoral Scholar | Nextflow Ambassador

LinkedIn Twitter Google Scholar Portfolio Stanford Profile YouTube Channel


About Me

I'm currently working as a Postdoctoral Scholar at Stanford University School of Medicine, specializing in AI-driven protein design and molecular modeling for battlefield medicine applications. As a Research Scientist with 8+ years of experience, I advance computational biology through the integration of algorithmic innovation and scalable deployment. I create open-source tools with strong familiarity in full-stack frameworks, uniting scientific research with robust software engineering. My expertise spans automation, performance profiling, and workflow optimization for high-throughput biological data—driving faster therapeutic discovery and measurable R&D impact. I define research frameworks and evaluation methodologies that shape community standards, lead cross-sector collaborations, and mentor emerging scientists. I architect end-to-end workflow systems from foundation models to active learning pipelines transforming computational advances into precision medicine breakthroughs.

Current Focus:

  • Designing novel anesthetics using AI-driven protein design and high-throughput virtual screening
  • Developing multimodal foundation models for protein structure prediction
  • Building open-source tools for reproducible computational biology research

"At the heart of every robust scientific protocol lies rigorous analysis. In an era of exponential data generation—where multi-omic, structural, clinical, and high-throughput datasets proliferate—we face not a scarcity of information but a scarcity of synthesis. My work centers on transforming raw biological noise into mechanistic clarity."


Most Utilised Skills

Top languages

Operating systems

Workflow Managers

Fun Frameworks

Version control tools

Dev Ops

CI/CD

Cloud & Workload managers

SGE

GitHub Streak


Educational Outreach

Created comprehensive tutorial series on YouTube covering:

  • AI-driven drug design
  • NGS analysis workflows
  • Quantum chemistry simulations
  • Molecular dynamics
  • Machine learning in bioinformatics

Impact: Empowering global learners to adopt computational research tools effectively

Connect With Me

I'm always open to collaboration opportunities in:

  • 🧬 AI-driven drug discovery
  • 🔬 Computational biology pipelines
  • 🤖 Foundation models for biological systems
  • 📊 Multi-omics data integration
  • 🚀 Open-source scientific software

Contact:

GitHub Statistics

GitHub Stats

Top Languages


Crafted with dedication to advancing computational biology and precision medicine

Profile Views

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  1. PandaDock PandaDock Public

    PandaDock: A Physics-Based Molecular Docking using Python

    Python 83 17

  2. Grid-Box-Generator Grid-Box-Generator Public

    This app helps you to generate or define grid box for Autodock Vina and Autodock4

    HTML 2 1

  3. PandaMap PandaMap Public

    Ligand-Protein Interaction Mapping

    HTML 67 10

  4. PandaMap-Color PandaMap-Color Public

    PandaMap-Color: Protein-Ligand Interaction Mapper with customizable color schemes

    Python 5 1

  5. PandaProt PandaProt Public

    A tool for mapping protein-protein, protein-nucleic acid, and antigen-antibody interactions

    HTML 11 3