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Xiaowei Bogetti edited this page Aug 21, 2025
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Step 1. First, you need to git clone the latest version of ProDy/prody main branch to a local directory.
For example, you may want to create a folder called "Apps", install and manage all the software packages in this folder. From your terminal, you may type:
mkdir Apps cd Apps git clone https://github.com/prody/ProDy.git cd ProDy
Step 2. Make sure you have the pypi API key ready (or paste the pypi API key into your ~/.pypirc)
Step 3. We suggest you to create a new conda environment, activate this new conda environment, such that ProDy installation does not change/overwrite your other conda environment. After this, you may type: pip install build twine auditwheel patchelf
Step 4. Make sure you are in the ProDy directory from git clone. Type in the terminal: python -m build
Step 5. Run the command: auditwheel repair dist/*.whl
Step 6. Run the command: twine upload --repository pypi dist/*tar.gz wheelhouse/*