All issues

Search results

Overlapping regions in 28S rRNA sequence map

Status: Open.

#221 In r2dt-bio/R2DT;

· p-vychik opened on Jun 17, 2026

are some templates maybe not findable?

Status: Open.

#216 In r2dt-bio/R2DT;

· Phylloxera opened on May 20, 2026

Bare-metal install blocked by hardcoded /rna/... paths in utils/core.py and utils/generate_cm_library.py

Status: Open.

#215 In r2dt-bio/R2DT;

· nawrockie opened on May 12, 2026

2D Visualization of longish RNAs/DNAs

Status: Open.

#211 In r2dt-bio/R2DT;

· govarguz opened on Apr 23, 2026

Recalculate templates with RNApuzzler to avoid overlaps

Status: Open.

#202 In r2dt-bio/R2DT;

· AntonPetrov opened on Feb 28, 2026

Checklist for release 2.2

Status: Open.

#190 In r2dt-bio/R2DT;

· AntonPetrov opened on Apr 28, 2025

Bug: the input file cannot include the word "type"

bugSomething isn't workingSomething isn't working

Status: Open.

Bug

#186 In r2dt-bio/R2DT;

· AntonPetrov opened on Apr 16, 2025

Create stable release tags for R2DT Docker image

enhancementNew feature or requestNew feature or request

Status: Open.

#181 In r2dt-bio/R2DT;

· AntonPetrov opened on Mar 2, 2025

Prevent crashes if input fasta contains duplicate sequence names

bugSomething isn't workingSomething isn't working

Status: Open.

#179 In r2dt-bio/R2DT;

· AntonPetrov opened on Feb 2, 2025

Expand the information provided in model.json

Status: Open.

#174 In r2dt-bio/R2DT;

· afg1 opened on Jan 13, 2025

Add an option to use 3D-faithful layouts like RNAscape or RNAview when 3D is available

Status: Open.

#166 In r2dt-bio/R2DT;

· AntonPetrov opened on Dec 5, 2024

Input sequence names identical to sequence name in Rfam alignment will cause R2DT to fail

Status: Open.

#161 In r2dt-bio/R2DT;

· nawrockie opened on Nov 15, 2024