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Bump the py-updates group across 1 directory with 78 updates #187

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Bumps the py-updates group with 78 updates in the / directory:

Package From To
awscli 1.40.17 1.43.15
polars 1.28.1 1.36.1
requests 2.32.3 2.32.5
biopython 1.85 1.86
boto3 1.38.18 1.42.9
botocore 1.38.18 1.42.9
certifi 2025.4.26 2025.11.12
charset-normalizer 3.4.2 3.4.4
cloudpathlib 0.21.1 0.23.0
docutils 0.19 0.22.3
idna 3.10 3.11
jellyfish 1.2.0 1.2.1
markdown-it-py 3.0.0 4.0.0
numpy 2.2.5 2.3.5
pandas 2.2.3 2.3.3
pyarrow 20.0.0 22.0.0
pygments 2.19.1 2.19.2
pyyaml 6.0.2 6.0.3
rich 14.0.0 14.2.0
rsa 4.7.2 4.9.1
s3transfer 0.12.0 0.16.0
structlog 25.3.0 25.5.0
tzdata 2025.2 2025.3
urllib3 2.4.0 2.6.2
zstandard 0.23.0 0.25.0
boto3-stubs 1.38.18 1.42.9
botocore-stubs 1.38.18 1.42.9
cffi 1.17.1 2.0.0
coverage 7.8.0 7.13.0
cryptography 44.0.3 46.0.3
freezegun 1.5.1 1.5.5
iniconfig 2.1.0 2.3.0
markupsafe 3.0.2 3.0.3
moto 5.1.4 5.1.18
mypy 1.15.0 1.19.0
mypy-boto3-s3 1.38.0 1.42.3
pycparser 2.22 2.23
pytest 8.3.5 9.0.2
pytest-mock 3.14.0 3.15.1
responses 0.25.7 0.25.8
ruff 0.11.10 0.14.9
types-awscrt 0.27.2 0.30.0
types-requests 2.32.0.20250515 2.32.4.20250913
types-s3transfer 0.12.0 0.16.0
typing-extensions 4.13.2 4.15.0
werkzeug 3.1.3 3.1.4
xmltodict 0.14.2 1.0.2
alabaster 0.7.16 1.0.0
anyio 4.9.0 4.12.0
beautifulsoup4 4.13.4 4.14.3
cachecontrol 0.14.3 0.14.4
click 8.2.0 8.3.1
contourpy 1.3.2 1.3.3
filelock 3.18.0 3.20.0
fonttools 4.58.0 4.61.1
furo 2024.8.6 2025.9.25
kiwisolver 1.4.8 1.4.9
matplotlib 3.10.3 3.10.8
mdit-py-plugins 0.4.2 0.5.0
more-itertools 10.7.0 10.8.0
msgpack 1.1.0 1.1.2
pillow 11.2.1 12.0.0
platformdirs 4.3.8 4.5.1
pyparsing 3.2.3 3.2.5
ruamel-yaml 0.18.10 0.18.16
ruamel-yaml-clib 0.2.12 0.2.15
soupsieve 2.7 2.8
sphinx 7.3.7 9.0.4
sphinx-autobuild 2024.10.3 2025.8.25
sphinx-autodoc-typehints 2.3.0 3.6.0
sphinx-jinja2-compat 0.3.0 0.4.1
sphinx-prompt 1.8.0 1.10.2
sphinx-tabs 3.4.5 3.4.7
sphinx-toolbox 4.0.0 4.1.0
sphinxext-opengraph 0.10.0 0.13.0
starlette 0.46.2 0.50.0
uvicorn 0.34.2 0.38.0
watchfiles 1.0.5 1.1.1

Updates awscli from 1.40.17 to 1.43.15

Commits
  • 7e01514 Merge branch 'release-1.43.15'
  • 72f9031 Bumping version to 1.43.15
  • 3edc753 Update changelog based on model updates
  • 70bb5d4 Merge branch 'release-1.43.14'
  • 7b40bb1 Merge branch 'release-1.43.14' into develop
  • acfdde6 Bumping version to 1.43.14
  • 74dbdfd Update changelog based on model updates
  • f1a04b9 Revert "Implement upgrade debug mode" (#9913)
  • c21885e Implement upgrade debug mode
  • c3f4569 Merge branch 'release-1.43.13'
  • Additional commits viewable in compare view

Updates polars from 1.28.1 to 1.36.1

Release notes

Sourced from polars's releases.

Python Polars 1.36.1

🚀 Performance improvements

  • Tune partitioned sink_parquet cloud performance (#25687)

✨ Enhancements

  • Allow creation of Object literal (#25690)
  • Don't collect schema in SQL union processing (#25675)

🐞 Bug fixes

  • Don't invalidate node in cluster-with-columns (#25714)
  • Move boto3 extra from s3fs in dev requirements (#25667)
  • Add missing type stubs for bin_slice, bin_head, and bin_tail (#25697)
  • Binary slice methods missing from Series and docs (#25683)
  • Mix-up of variable_name/value_name in unpivot (#25685)
  • Invalid usage of drop_first in to_dummies when nulls present (#25435)

📖 Documentation

  • Fix typos in Excel and Pandas migration guides (#25709)
  • Add "right" to how options in join() docstrings (#25678)

🛠️ Other improvements

  • Move Object lit fix earlier in the function (#25713)
  • Remove unused decimal file (#25701)
  • Move boto3 extra from s3fs in dev requirements (#25667)
  • Upgrade to latest version of sqlparser-rs (#25673)
  • Update slab to version without RUSTSEC (#25686)
  • Fix typo (#25684)

Thank you to all our contributors for making this release possible! @​AndreaBozzo, @​Kevin-Patyk, @​alexander-beedie, @​dsprenkels, @​jamesfricker, @​mcrumiller, @​nameexhaustion, @​orlp and @​ritchie46

Python Polars 1.36.0

🏆 Highlights

  • Add Extension types (#25322)

✨ Enhancements

  • Add SQL support for the QUALIFY clause (#25652)
  • Add bin.slice(), bin.head(), and bin.tail() methods (#25647)
  • Add SQL syntax support for CROSS JOIN UNNEST(col) (#25623)
  • Add separate env var to log tracked metrics (#25586)
  • Expose fields for generating physical plan visualization data (#25562)
  • Allow pl.Object in pivot value (#25533)
  • Minor improvement for as_struct repr (#25529)
  • Temporal quantile in rolling context (#25479)

... (truncated)

Commits

Updates requests from 2.32.3 to 2.32.5

Release notes

Sourced from requests's releases.

v2.32.5

2.32.5 (2025-08-18)

Bugfixes

  • The SSLContext caching feature originally introduced in 2.32.0 has created a new class of issues in Requests that have had negative impact across a number of use cases. The Requests team has decided to revert this feature as long term maintenance of it is proving to be unsustainable in its current iteration.

Deprecations

  • Added support for Python 3.14.
  • Dropped support for Python 3.8 following its end of support.

v2.32.4

2.32.4 (2025-06-10)

Security

  • CVE-2024-47081 Fixed an issue where a maliciously crafted URL and trusted environment will retrieve credentials for the wrong hostname/machine from a netrc file. (#6965)

Improvements

  • Numerous documentation improvements

Deprecations

  • Added support for pypy 3.11 for Linux and macOS. (#6926)
  • Dropped support for pypy 3.9 following its end of support. (#6926)
Changelog

Sourced from requests's changelog.

2.32.5 (2025-08-18)

Bugfixes

  • The SSLContext caching feature originally introduced in 2.32.0 has created a new class of issues in Requests that have had negative impact across a number of use cases. The Requests team has decided to revert this feature as long term maintenance of it is proving to be unsustainable in its current iteration.

Deprecations

  • Added support for Python 3.14.
  • Dropped support for Python 3.8 following its end of support.

2.32.4 (2025-06-10)

Security

  • CVE-2024-47081 Fixed an issue where a maliciously crafted URL and trusted environment will retrieve credentials for the wrong hostname/machine from a netrc file.

Improvements

  • Numerous documentation improvements

Deprecations

  • Added support for pypy 3.11 for Linux and macOS.
  • Dropped support for pypy 3.9 following its end of support.
Commits
  • b25c87d v2.32.5
  • 131e506 Merge pull request #7010 from psf/dependabot/github_actions/actions/checkout-...
  • b336cb2 Bump actions/checkout from 4.2.0 to 5.0.0
  • 46e939b Update publish workflow to use artifact-id instead of name
  • 4b9c546 Merge pull request #6999 from psf/dependabot/github_actions/step-security/har...
  • 7618dbe Bump step-security/harden-runner from 2.12.0 to 2.13.0
  • 2edca11 Add support for Python 3.14 and drop support for Python 3.8 (#6993)
  • fec96cd Update Makefile rules (#6996)
  • d58d8aa docs: clarify timeout parameter uses seconds in Session.request (#6994)
  • 91a3eab Bump github/codeql-action from 3.28.5 to 3.29.0
  • Additional commits viewable in compare view

Updates biopython from 1.85 to 1.86

Changelog

Sourced from biopython's changelog.

28 October 2025: Biopython 1.86

This release of Biopython supports Python 3.10, 3.11, 3.12, 3.13 and 3.14. It has also been tested on PyPy3.10 v7.3.19.

Bio.SearchIO now supports parsing the tabular and plain text output of Infernal <http://eddylab.org/infernal/> (v1.0.0+) RNA search tool. The format names are infernal-tab and infernal-text.

The default value of the gap score of a PairwiseAligner object was changed in this release. Previously, for consistency with Bio.pairwise2, the default value for gap score was 0. However, this means that a mismatch, an insertion followed by a deletion, and a deletion followed by an insertion all get assigned a score of 0. The aligner then finds a large number of alignments that are logically the same, but have trivial differences between them. For example, aligning AAACAAA to AAAGAAA previously yielded the following three alignments, all with score 6::

 AAACAAA        AAAC-AAA        AAA-CAAA
 AAAGAAA        AAA-GAAA        AAAG-AAA

With the new default parameter for the gap score, only the first alignment is returned.

Bio.PDB.PDBIO now ensures that b-factor values are always at most 6 characters to ensure that we do not violate the wwPDB specification. This should not have an impact on the majority of uses, as b-factor values are generally small (less than 100). When 1000 <= b-factor < 10_000, the value is rounded to a single decimal place. When, 10_000 <= b-factor < 999_999, the value is rounded to zero decimal places. Values above 999_999 are now clamped. The justification for this is the rise in the b-factor field being used for additional metadata, typically from computational tools.

Bio.Align now provides a method Alignment.from_alignments_with_same_reference to construct a multiple sequence alignment from a collection of alignments that share the same reference sequence.

Bio.PDB.PDBIO will now raise module specific warnings: Bio.PDB.PDBExceptions.PDBIOWarning.

Bio.PDB.SCADIO now supports object selection by color in the OpenSCAD output file. This enables generation of separate STL files for each color for printing protein structures on multi-material 3D printers.

The iplotx library is mentioned in the Tutorial as an option to visualise trees using complex style options.

Many thanks to the Biopython developers and community for making this release possible, especially the following contributors:

... (truncated)

Commits

Updates boto3 from 1.38.18 to 1.42.9

Commits
  • 70183cf Merge branch 'release-1.42.9'
  • 02ef27f Bumping version to 1.42.9
  • b4821c1 Add changelog entries from botocore
  • 8c12c9d Merge branch 'release-1.42.8'
  • 39f484c Merge branch 'release-1.42.8' into develop
  • 3c5c225 Bumping version to 1.42.8
  • d8c15ca Add changelog entries from botocore
  • e70c5a2 Use f-strings instead of string concatenation (#4675)
  • 2295d41 Merge branch 'release-1.42.7'
  • f2bd57c Merge branch 'release-1.42.7' into develop
  • Additional commits viewable in compare view

Updates botocore from 1.38.18 to 1.42.9

Commits

Updates certifi from 2025.4.26 to 2025.11.12

Commits

Updates charset-normalizer from 3.4.2 to 3.4.4

Release notes

Sourced from charset-normalizer's releases.

Version 3.4.4

3.4.4 (2025-10-13)

Changed

  • Bound setuptools to a specific constraint setuptools>=68,<=81.
  • Raised upper bound of mypyc for the optional pre-built extension to v1.18.2

Removed

  • setuptools-scm as a build dependency.

Misc

  • Enforced hashes in dev-requirements.txt and created ci-requirements.txt for security purposes.
  • Additional pre-built wheels for riscv64, s390x, and armv7l architectures.
  • Restore multiple.intoto.jsonl in GitHub releases in addition to individual attestation file per wheel.

Version 3.4.3

3.4.3 (2025-08-09)

Changed

  • mypy(c) is no longer a required dependency at build time if CHARSET_NORMALIZER_USE_MYPYC isn't set to 1. (#595) (#583)
  • automatically lower confidence on small bytes samples that are not Unicode in detect output legacy function. (#391)

Added

  • Custom build backend to overcome inability to mark mypy as an optional dependency in the build phase.
  • Support for Python 3.14

Fixed

  • sdist archive contained useless directories.
  • automatically fallback on valid UTF-16 or UTF-32 even if the md says it's noisy. (#633)

Misc

  • SBOM are automatically published to the relevant GitHub release to comply with regulatory changes. Each published wheel comes with its SBOM. We choose CycloneDX as the format.
  • Prebuilt optimized wheel are no longer distributed by default for CPython 3.7 due to a change in cibuildwheel.
Changelog

Sourced from charset-normalizer's changelog.

3.4.4 (2025-10-13)

Changed

  • Bound setuptools to a specific constraint setuptools>=68,<=81.
  • Raised upper bound of mypyc for the optional pre-built extension to v1.18.2

Removed

  • setuptools-scm as a build dependency.

Misc

  • Enforced hashes in dev-requirements.txt and created ci-requirements.txt for security purposes.
  • Additional pre-built wheels for riscv64, s390x, and armv7l architectures.
  • Restore multiple.intoto.jsonl in GitHub releases in addition to individual attestation file per wheel.

3.4.3 (2025-08-09)

Changed

  • mypy(c) is no longer a required dependency at build time if CHARSET_NORMALIZER_USE_MYPYC isn't set to 1. (#595) (#583)
  • automatically lower confidence on small bytes samples that are not Unicode in detect output legacy function. (#391)

Added

  • Custom build backend to overcome inability to mark mypy as an optional dependency in the build phase.
  • Support for Python 3.14

Fixed

  • sdist archive contained useless directories.
  • automatically fallback on valid UTF-16 or UTF-32 even if the md says it's noisy. (#633)

Misc

  • SBOM are automatically published to the relevant GitHub release to comply with regulatory changes. Each published wheel comes with its SBOM. We choose CycloneDX as the format.
  • Prebuilt optimized wheel are no longer distributed by default for CPython 3.7 due to a change in cibuildwheel.
Commits
  • b30ffdc 🔧 fix checksum step in cd.yml
  • d3fbfcf 🔧 fix cd.yml
  • dafbb95 Release 3.4.4 (#658)
  • 1f18ffa ⬆️ raise mypy upper bound to 1.18.2
  • ef4ac69 Merge branch 'release-3.4.4' of github.com:jawah/charset_normalizer into rele...
  • 4b35dda 📝 write changelog for 3.4.4
  • 0ec6452 🔧 update cd.yml workflow (add riscv64, s390x and armv7l)
  • f341ede ⬆️ upgrade dependencies (dev, ci)
  • a308841 📝 write changelog for 3.4.4
  • 9c906da 🔧 update cd.yml workflow (add riscv64, s390x and armv7l)
  • Additional commits viewable in compare view

Updates cloudpathlib from 0.21.1 to 0.23.0

Release notes

Sourced from cloudpathlib's releases.

v0.23.0

  • Added support for Python 3.14 (Issue #529, PR #530)
    • Changed CloudPath.copy to have the first parameter named target instead of destination and added new follow_symlinks and preserve_metadata kwargs. Breaking change for users that relied on the first parameter being named destination instead of target.
    • Added CloudPath.copy_into to copy a file or directory into another file or directory.
    • Added CloudPath.move to move a file or directory to another location.
    • Added CloudPath.move_into to move a file or directory into another file or directory.
    • Added CloudPathInfo and CloudPath.info to get information about a file or directory.
    • Added additional no-op kwargs to mkdir, touch, glob, rglob, stat to match pathlib.

v0.22.0

  • Fixed issue with GS credentials, using default auth enables a wider set of authentication methods in GS (Issue #390, PR #514, thanks @​ljyanesm)
  • Added support for http(s) urls with HttpClient, HttpPath, HttpsClient, and HttpsPath. (Issue #455, PR #468)
  • Added experimental support for patching the builtins open, os, os.path, and glob to work with CloudPath objects. It is off by default; see the new "Compatibility" section in the docs for more information. (Issue #128, PR #322)
  • Added support for CloudPath(*parts) to create a CloudPath object from a list of parts (to match pathlib.Path). This is a potentially breaking change for users that relied on the second arg being the client instead of making it an explicit kwarg. (PR #322)
Changelog

Sourced from cloudpathlib's changelog.

v0.23.0 (2025-10-07)

  • Added support for Python 3.14 (Issue #529, PR #530)
    • Changed CloudPath.copy to have the first parameter named target instead of destination and added new follow_symlinks and preserve_metadata kwargs. Breaking change for users that relied on the first parameter being named destination instead of target.
    • Added CloudPath.copy_into to copy a file or directory into another file or directory.
    • Added CloudPath.move to move a file or directory to another location.
    • Added CloudPath.move_into to move a file or directory into another file or directory.
    • Added CloudPathInfo and CloudPath.info to get information about a file or directory.
    • Added additional no-op kwargs to mkdir, touch, glob, rglob, stat to match pathlib.

v0.22.0 (2025-08-29)

  • Fixed issue with GS credentials, using default auth enables a wider set of authentication methods in GS (Issue #390, PR #514, thanks @​ljyanesm)
  • Added support for http(s) urls with HttpClient, HttpPath, HttpsClient, and HttpsPath. (Issue #455, PR #468)
  • Added experimental support for patching the builtins open, os, os.path, and glob to work with CloudPath objects. It is off by default; see the new "Compatibility" section in the docs for more information. (Issue #128, PR #322)
  • Added support for CloudPath(*parts) to create a CloudPath object from a list of parts (to match pathlib.Path). This is a potentially breaking change for users that relied on the second arg being the client instead of making it an explicit kwarg. (PR #322)
Commits

Updates docutils from 0.19 to 0.22.3

Commits

Updates idna from 3.10 to 3.11

Changelog

Sourced from idna's changelog.

3.11 (2025-10-12)

  • Update to Unicode 16.0.0, including significant changes to UTS46 processing. As a result of Unicode ending support for it, transitional processing no longer has an effect and returns the same result.
  • Add support for Python 3.14, lowest supported version is Python 3.8.
  • Various updates to packaging, including PEP 740 support.
Commits
  • ad949ee Release v3.11
  • cae4ba7 Second release candidate for 3.11
  • 8adb305 Add space in RST link
  • 74cb2b6 Release candidate for 3.11
  • 05dab09 Format idna-data with ruff
  • 90eac78 Apply ruff formatting
  • a31ce7e Remove errant test vectors
  • 81f0333 Omit vectors known to be broken in test suite
  • a0f3257 Merge branch 'master' into unicode-16-uts46-changes
  • 38d9886 Remove extra UTS46 test vector
  • Additional commits viewable in compare view

Updates jellyfish from 1.2.0 to 1.2.1

Updates markdown-it-py from 3.0.0 to 4.0.0

Release notes

Sourced from markdown-it-py's releases.

v4.0.0

What's Changed

This primarily drops support for Python 3.8 and 3.9, adds support for Python 3.13, and updates the parser to comply with Commonmark 0.31.2 and Markdown-It v14.1.0.

Upgrades

Improvements

Bug fixes

Maintenance

Documentation

... (truncated)

Changelog

Sourced from markdown-it-py's changelog.

4.0.0 - 2024-08-10

This primarily drops support for Python 3.9, adds support for Python 3.13, and updates the parser to comply with Commonmark 0.31.2 and Markdown-It v14.1.0.

  • ⬆️ Drop support for Python 3.9 in #360
  • ⬆️ Comply with Commonmark 0.31.2 in #362
  • 👌 Improve performance of "text" inline rule in #347
  • 👌 Use str.removesuffix in #348
  • 👌 limit the number of autocompleted cells in a table in #364
  • 👌 fix quadratic complexity in reference parser in #367
  • 🐛 Fix emphasis inside raw links bugs in #320

Full Changelog: executablebooks/markdown-it-py@v3.0.0...v4.0.0

Commits

Updates numpy from 2.2.5 to 2.3.5

Release notes

Sourced from numpy's releases.

2.3.5 (Nov 16, 2025)

NumPy 2.3.5 Release Notes

The NumPy 2.3.5 release is a patch release split between a number of maintenance updates and bug fixes. This release supports Python versions 3.11-3.14.

Contributors

A total of 10 people contributed to this release. People with a "+" by their names contributed a patch for the first time.

  • Aaron Kollasch +
  • Charles Harris
  • Joren Hammudoglu
  • Matti Picus
  • Nathan Goldbaum
  • Rafael Laboissière +
  • Sayed Awad
  • Sebastian Berg
  • Warren Weckesser
  • Yasir Ashfaq +

Pull requests merged

A total of 16 pull requests were merged for this release.

  • #29979: MAINT: Prepare 2.3.x for further development
  • #30026: SIMD, BLD: Backport FPMATH mode on x86-32 and filter successor...
  • #30029: MAINT: Backport write_release.py
  • #30041: TYP: Various typing updates
  • #30059: BUG: Fix np.strings.slice if stop=None or start and stop >= len...
  • #30063: BUG: Fix np.strings.slice if start > stop
  • #30076: BUG: avoid negating INT_MIN in PyArray_Round implementation (#30071)
  • #30090: BUG: Fix resize when it contains references (#29970)
  • #30129: BLD: update scipy-openblas, use -Dpkg_config_path (#30049)
  • #30130: BUG: Avoid compilation error of wrapper file generated with SWIG...
  • #30157: BLD: use scipy-openblas 0.3.30.7 (#30132)
  • #30158: DOC: Remove nonexistent order parameter docs of ma.asanyarray...
  • #30185: BUG: Fix check of PyMem_Calloc return value. (#30176)
  • #30217: DOC: fix links for newly rebuilt numpy-tutorials site
  • #30218: BUG: Fix build on s390x with clang (#30214)
  • #30237: ENH: Make FPE blas check a runtime check for all apple arm systems

v2.3.4 (Oct 15, 2025)

NumPy 2.3.4 Release Notes

The NumPy 2.3.4 release is a patch release split between a number of maintenance updates and bug fixes. This release supports Python versions 3.11-3.14. This release is based on Python 3.14.0 final.

... (truncated)

Commits
  • c3d60fc Merge pull request #30238 from charris/prepare-2.3.5
  • 11451fa REL: Prepare for the NumPy 2.3.5 release
  • eab5bd4 Merge pull request #30237 from charris/backport-30102
  • 7cea31a Fixup merge of multiarraymodule.c
  • b898173 Update numpy/_core/src/common/blas_utils.h
  • f755483 Report FPE ignoring in matmul in show_runtime()
  • c47116f Move test to Python
  • bd7b93f ooops, needs to be a calloc of course.
  • 83a1517 Guard for HAVE_CB...

    Description has been truncated

@dependabot
Bump the py-updates group across 1 directory with 78 updates
d73b363 
Bumps the py-updates group with 78 updates in the / directory:

| Package | From | To |
| --- | --- | --- |
| [awscli](https://github.com/aws/aws-cli) | `1.40.17` | `1.43.15` |
| [polars](https://github.com/pola-rs/polars) | `1.28.1` | `1.36.1` |
| [requests](https://github.com/psf/requests) | `2.32.3` | `2.32.5` |
| [biopython](https://github.com/biopython/biopython) | `1.85` | `1.86` |
| [boto3](https://github.com/boto/boto3) | `1.38.18` | `1.42.9` |
| [botocore](https://github.com/boto/botocore) | `1.38.18` | `1.42.9` |
| [certifi](https://github.com/certifi/python-certifi) | `2025.4.26` | `2025.11.12` |
| [charset-normalizer](https://github.com/jawah/charset_normalizer) | `3.4.2` | `3.4.4` |
| [cloudpathlib](https://github.com/drivendataorg/cloudpathlib) | `0.21.1` | `0.23.0` |
| [docutils](https://github.com/rtfd/recommonmark) | `0.19` | `0.22.3` |
| [idna](https://github.com/kjd/idna) | `3.10` | `3.11` |
| [jellyfish](https://jellyfish.jpt.sh/) | `1.2.0` | `1.2.1` |
| [markdown-it-py](https://github.com/executablebooks/markdown-it-py) | `3.0.0` | `4.0.0` |
| [numpy](https://github.com/numpy/numpy) | `2.2.5` | `2.3.5` |
| [pandas](https://github.com/pandas-dev/pandas) | `2.2.3` | `2.3.3` |
| [pyarrow](https://github.com/apache/arrow) | `20.0.0` | `22.0.0` |
| [pygments](https://github.com/pygments/pygments) | `2.19.1` | `2.19.2` |
| [pyyaml](https://github.com/yaml/pyyaml) | `6.0.2` | `6.0.3` |
| [rich](https://github.com/Textualize/rich) | `14.0.0` | `14.2.0` |
| [rsa](https://github.com/sybrenstuvel/python-rsa) | `4.7.2` | `4.9.1` |
| [s3transfer](https://github.com/boto/s3transfer) | `0.12.0` | `0.16.0` |
| [structlog](https://github.com/hynek/structlog) | `25.3.0` | `25.5.0` |
| [tzdata](https://github.com/python/tzdata) | `2025.2` | `2025.3` |
| [urllib3](https://github.com/urllib3/urllib3) | `2.4.0` | `2.6.2` |
| [zstandard](https://github.com/indygreg/python-zstandard) | `0.23.0` | `0.25.0` |
| [boto3-stubs](https://github.com/youtype/mypy_boto3_builder) | `1.38.18` | `1.42.9` |
| [botocore-stubs](https://github.com/youtype/botocore-stubs) | `1.38.18` | `1.42.9` |
| [cffi](https://github.com/python-cffi/cffi) | `1.17.1` | `2.0.0` |
| [coverage](https://github.com/coveragepy/coveragepy) | `7.8.0` | `7.13.0` |
| [cryptography](https://github.com/pyca/cryptography) | `44.0.3` | `46.0.3` |
| [freezegun](https://github.com/spulec/freezegun) | `1.5.1` | `1.5.5` |
| [iniconfig](https://github.com/pytest-dev/iniconfig) | `2.1.0` | `2.3.0` |
| [markupsafe](https://github.com/pallets/markupsafe) | `3.0.2` | `3.0.3` |
| [moto](https://github.com/getmoto/moto) | `5.1.4` | `5.1.18` |
| [mypy](https://github.com/python/mypy) | `1.15.0` | `1.19.0` |
| [mypy-boto3-s3](https://github.com/youtype/mypy_boto3_builder) | `1.38.0` | `1.42.3` |
| [pycparser](https://github.com/eliben/pycparser) | `2.22` | `2.23` |
| [pytest](https://github.com/pytest-dev/pytest) | `8.3.5` | `9.0.2` |
| [pytest-mock](https://github.com/pytest-dev/pytest-mock) | `3.14.0` | `3.15.1` |
| [responses](https://github.com/getsentry/responses) | `0.25.7` | `0.25.8` |
| [ruff](https://github.com/astral-sh/ruff) | `0.11.10` | `0.14.9` |
| [types-awscrt](https://github.com/youtype/types-awscrt) | `0.27.2` | `0.30.0` |
| [types-requests](https://github.com/typeshed-internal/stub_uploader) | `2.32.0.20250515` | `2.32.4.20250913` |
| [types-s3transfer](https://github.com/youtype/types-s3transfer) | `0.12.0` | `0.16.0` |
| [typing-extensions](https://github.com/python/typing_extensions) | `4.13.2` | `4.15.0` |
| [werkzeug](https://github.com/pallets/werkzeug) | `3.1.3` | `3.1.4` |
| [xmltodict](https://github.com/martinblech/xmltodict) | `0.14.2` | `1.0.2` |
| [alabaster](https://github.com/sphinx-doc/alabaster) | `0.7.16` | `1.0.0` |
| [anyio](https://github.com/agronholm/anyio) | `4.9.0` | `4.12.0` |
| [beautifulsoup4](https://www.crummy.com/software/BeautifulSoup/bs4/) | `4.13.4` | `4.14.3` |
| [cachecontrol](https://github.com/psf/cachecontrol) | `0.14.3` | `0.14.4` |
| [click](https://github.com/pallets/click) | `8.2.0` | `8.3.1` |
| [contourpy](https://github.com/contourpy/contourpy) | `1.3.2` | `1.3.3` |
| [filelock](https://github.com/tox-dev/py-filelock) | `3.18.0` | `3.20.0` |
| [fonttools](https://github.com/fonttools/fonttools) | `4.58.0` | `4.61.1` |
| [furo](https://github.com/pradyunsg/furo) | `2024.8.6` | `2025.9.25` |
| [kiwisolver](https://github.com/nucleic/kiwi) | `1.4.8` | `1.4.9` |
| [matplotlib](https://github.com/matplotlib/matplotlib) | `3.10.3` | `3.10.8` |
| [mdit-py-plugins](https://github.com/executablebooks/mdit-py-plugins) | `0.4.2` | `0.5.0` |
| [more-itertools](https://github.com/more-itertools/more-itertools) | `10.7.0` | `10.8.0` |
| [msgpack](https://github.com/msgpack/msgpack-python) | `1.1.0` | `1.1.2` |
| [pillow](https://github.com/python-pillow/Pillow) | `11.2.1` | `12.0.0` |
| [platformdirs](https://github.com/tox-dev/platformdirs) | `4.3.8` | `4.5.1` |
| [pyparsing](https://github.com/pyparsing/pyparsing) | `3.2.3` | `3.2.5` |
| ruamel-yaml | `0.18.10` | `0.18.16` |
| ruamel-yaml-clib | `0.2.12` | `0.2.15` |
| [soupsieve](https://github.com/facelessuser/soupsieve) | `2.7` | `2.8` |
| [sphinx](https://github.com/sphinx-doc/sphinx) | `7.3.7` | `9.0.4` |
| [sphinx-autobuild](https://github.com/sphinx-doc/sphinx-autobuild) | `2024.10.3` | `2025.8.25` |
| [sphinx-autodoc-typehints](https://github.com/tox-dev/sphinx-autodoc-typehints) | `2.3.0` | `3.6.0` |
| [sphinx-jinja2-compat](https://github.com/sphinx-toolbox/sphinx-jinja2-compat) | `0.3.0` | `0.4.1` |
| [sphinx-prompt](https://github.com/sbrunner/sphinx-prompt) | `1.8.0` | `1.10.2` |
| [sphinx-tabs](https://github.com/executablebooks/sphinx-tabs) | `3.4.5` | `3.4.7` |
| [sphinx-toolbox](https://github.com/sphinx-toolbox/sphinx-toolbox) | `4.0.0` | `4.1.0` |
| [sphinxext-opengraph](https://github.com/sphinx-doc/sphinxext-opengraph) | `0.10.0` | `0.13.0` |
| [starlette](https://github.com/Kludex/starlette) | `0.46.2` | `0.50.0` |
| [uvicorn](https://github.com/Kludex/uvicorn) | `0.34.2` | `0.38.0` |
| [watchfiles](https://github.com/samuelcolvin/watchfiles) | `1.0.5` | `1.1.1` |



Updates `awscli` from 1.40.17 to 1.43.15
- [Release notes](https://github.com/aws/aws-cli/releases)
- [Commits](aws/aws-cli@1.40.17...1.43.15)

Updates `polars` from 1.28.1 to 1.36.1
- [Release notes](https://github.com/pola-rs/polars/releases)
- [Commits](pola-rs/polars@py-1.28.1...py-1.36.1)

Updates `requests` from 2.32.3 to 2.32.5
- [Release notes](https://github.com/psf/requests/releases)
- [Changelog](https://github.com/psf/requests/blob/main/HISTORY.md)
- [Commits](psf/requests@v2.32.3...v2.32.5)

Updates `biopython` from 1.85 to 1.86
- [Changelog](https://github.com/biopython/biopython/blob/master/NEWS.rst)
- [Commits](https://github.com/biopython/biopython/commits)

Updates `boto3` from 1.38.18 to 1.42.9
- [Release notes](https://github.com/boto/boto3/releases)
- [Commits](boto/boto3@1.38.18...1.42.9)

Updates `botocore` from 1.38.18 to 1.42.9
- [Commits](boto/botocore@1.38.18...1.42.9)

Updates `certifi` from 2025.4.26 to 2025.11.12
- [Commits](certifi/python-certifi@2025.04.26...2025.11.12)

Updates `charset-normalizer` from 3.4.2 to 3.4.4
- [Release notes](https://github.com/jawah/charset_normalizer/releases)
- [Changelog](https://github.com/jawah/charset_normalizer/blob/master/CHANGELOG.md)
- [Commits](jawah/charset_normalizer@3.4.2...3.4.4)

Updates `cloudpathlib` from 0.21.1 to 0.23.0
- [Release notes](https://github.com/drivendataorg/cloudpathlib/releases)
- [Changelog](https://github.com/drivendataorg/cloudpathlib/blob/master/HISTORY.md)
- [Commits](drivendataorg/cloudpathlib@v0.21.1...v0.23.0)

Updates `docutils` from 0.19 to 0.22.3
- [Changelog](https://github.com/readthedocs/recommonmark/blob/master/CHANGELOG.md)
- [Commits](https://github.com/rtfd/recommonmark/commits)

Updates `idna` from 3.10 to 3.11
- [Release notes](https://github.com/kjd/idna/releases)
- [Changelog](https://github.com/kjd/idna/blob/master/HISTORY.rst)
- [Commits](kjd/idna@v3.10...v3.11)

Updates `jellyfish` from 1.2.0 to 1.2.1

Updates `markdown-it-py` from 3.0.0 to 4.0.0
- [Release notes](https://github.com/executablebooks/markdown-it-py/releases)
- [Changelog](https://github.com/executablebooks/markdown-it-py/blob/master/CHANGELOG.md)
- [Commits](executablebooks/markdown-it-py@v3.0.0...v4.0.0)

Updates `numpy` from 2.2.5 to 2.3.5
- [Release notes](https://github.com/numpy/numpy/releases)
- [Changelog](https://github.com/numpy/numpy/blob/main/doc/RELEASE_WALKTHROUGH.rst)
- [Commits](numpy/numpy@v2.2.5...v2.3.5)

Updates `pandas` from 2.2.3 to 2.3.3
- [Release notes](https://github.com/pandas-dev/pandas/releases)
- [Commits](pandas-dev/pandas@v2.2.3...v2.3.3)

Updates `pyarrow` from 20.0.0 to 22.0.0
- [Release notes](https://github.com/apache/arrow/releases)
- [Commits](apache/arrow@apache-arrow-20.0.0...apache-arrow-22.0.0)

Updates `pygments` from 2.19.1 to 2.19.2
- [Release notes](https://github.com/pygments/pygments/releases)
- [Changelog](https://github.com/pygments/pygments/blob/master/CHANGES)
- [Commits](pygments/pygments@2.19.1...2.19.2)

Updates `pyyaml` from 6.0.2 to 6.0.3
- [Release notes](https://github.com/yaml/pyyaml/releases)
- [Changelog](https://github.com/yaml/pyyaml/blob/6.0.3/CHANGES)
- [Commits](yaml/pyyaml@6.0.2...6.0.3)

Updates `rich` from 14.0.0 to 14.2.0
- [Release notes](https://github.com/Textualize/rich/releases)
- [Changelog](https://github.com/Textualize/rich/blob/master/CHANGELOG.md)
- [Commits](Textualize/rich@v14.0.0...v14.2.0)

Updates `rsa` from 4.7.2 to 4.9.1
- [Changelog](https://github.com/sybrenstuvel/python-rsa/blob/main/CHANGELOG.md)
- [Commits](https://github.com/sybrenstuvel/python-rsa/commits)

Updates `s3transfer` from 0.12.0 to 0.16.0
- [Changelog](https://github.com/boto/s3transfer/blob/develop/CHANGELOG.rst)
- [Commits](boto/s3transfer@0.12.0...0.16.0)

Updates `structlog` from 25.3.0 to 25.5.0
- [Release notes](https://github.com/hynek/structlog/releases)
- [Changelog](https://github.com/hynek/structlog/blob/main/CHANGELOG.md)
- [Commits](hynek/structlog@25.3.0...25.5.0)

Updates `tzdata` from 2025.2 to 2025.3
- [Release notes](https://github.com/python/tzdata/releases)
- [Changelog](https://github.com/python/tzdata/blob/master/NEWS.md)
- [Commits](python/tzdata@2025.2...2025.3)

Updates `urllib3` from 2.4.0 to 2.6.2
- [Release notes](https://github.com/urllib3/urllib3/releases)
- [Changelog](https://github.com/urllib3/urllib3/blob/main/CHANGES.rst)
- [Commits](urllib3/urllib3@2.4.0...2.6.2)

Updates `zstandard` from 0.23.0 to 0.25.0
- [Release notes](https://github.com/indygreg/python-zstandard/releases)
- [Changelog](https://github.com/indygreg/python-zstandard/blob/main/docs/news.rst)
- [Commits](indygreg/python-zstandard@0.23.0...0.25.0)

Updates `boto3-stubs` from 1.38.18 to 1.42.9
- [Release notes](https://github.com/youtype/mypy_boto3_builder/releases)
- [Commits](https://github.com/youtype/mypy_boto3_builder/commits)

Updates `botocore-stubs` from 1.38.18 to 1.42.9
- [Release notes](https://github.com/youtype/botocore-stubs/releases)
- [Commits](https://github.com/youtype/botocore-stubs/commits)

Updates `cffi` from 1.17.1 to 2.0.0
- [Release notes](https://github.com/python-cffi/cffi/releases)
- [Commits](python-cffi/cffi@v1.17.1...v2.0.0)

Updates `coverage` from 7.8.0 to 7.13.0
- [Release notes](https://github.com/coveragepy/coveragepy/releases)
- [Changelog](https://github.com/coveragepy/coveragepy/blob/main/CHANGES.rst)
- [Commits](coveragepy/coveragepy@7.8.0...7.13.0)

Updates `cryptography` from 44.0.3 to 46.0.3
- [Changelog](https://github.com/pyca/cryptography/blob/main/CHANGELOG.rst)
- [Commits](pyca/cryptography@44.0.3...46.0.3)

Updates `freezegun` from 1.5.1 to 1.5.5
- [Release notes](https://github.com/spulec/freezegun/releases)
- [Changelog](https://github.com/spulec/freezegun/blob/master/CHANGELOG)
- [Commits](spulec/freezegun@1.5.1...1.5.5)

Updates `iniconfig` from 2.1.0 to 2.3.0
- [Release notes](https://github.com/pytest-dev/iniconfig/releases)
- [Changelog](https://github.com/pytest-dev/iniconfig/blob/main/CHANGELOG)
- [Commits](pytest-dev/iniconfig@v2.1.0...v2.3.0)

Updates `markupsafe` from 3.0.2 to 3.0.3
- [Release notes](https://github.com/pallets/markupsafe/releases)
- [Changelog](https://github.com/pallets/markupsafe/blob/main/CHANGES.rst)
- [Commits](pallets/markupsafe@3.0.2...3.0.3)

Updates `moto` from 5.1.4 to 5.1.18
- [Release notes](https://github.com/getmoto/moto/releases)
- [Changelog](https://github.com/getmoto/moto/blob/master/CHANGELOG.md)
- [Commits](getmoto/moto@5.1.4...5.1.18)

Updates `mypy` from 1.15.0 to 1.19.0
- [Changelog](https://github.com/python/mypy/blob/master/CHANGELOG.md)
- [Commits](python/mypy@v1.15.0...v1.19.0)

Updates `mypy-boto3-s3` from 1.38.0 to 1.42.3
- [Release notes](https://github.com/youtype/mypy_boto3_builder/releases)
- [Commits](https://github.com/youtype/mypy_boto3_builder/commits)

Updates `pycparser` from 2.22 to 2.23
- [Release notes](https://github.com/eliben/pycparser/releases)
- [Changelog](https://github.com/eliben/pycparser/blob/main/CHANGES)
- [Commits](eliben/pycparser@release_v2.22...release_v2.23)

Updates `pytest` from 8.3.5 to 9.0.2
- [Release notes](https://github.com/pytest-dev/pytest/releases)
- [Changelog](https://github.com/pytest-dev/pytest/blob/main/CHANGELOG.rst)
- [Commits](pytest-dev/pytest@8.3.5...9.0.2)

Updates `pytest-mock` from 3.14.0 to 3.15.1
- [Release notes](https://github.com/pytest-dev/pytest-mock/releases)
- [Changelog](https://github.com/pytest-dev/pytest-mock/blob/main/CHANGELOG.rst)
- [Commits](pytest-dev/pytest-mock@v3.14.0...v3.15.1)

Updates `responses` from 0.25.7 to 0.25.8
- [Release notes](https://github.com/getsentry/responses/releases)
- [Changelog](https://github.com/getsentry/responses/blob/master/CHANGES)
- [Commits](getsentry/responses@0.25.7...0.25.8)

Updates `ruff` from 0.11.10 to 0.14.9
- [Release notes](https://github.com/astral-sh/ruff/releases)
- [Changelog](https://github.com/astral-sh/ruff/blob/main/CHANGELOG.md)
- [Commits](astral-sh/ruff@0.11.10...0.14.9)

Updates `types-awscrt` from 0.27.2 to 0.30.0
- [Release notes](https://github.com/youtype/types-awscrt/releases)
- [Commits](https://github.com/youtype/types-awscrt/commits)

Updates `types-requests` from 2.32.0.20250515 to 2.32.4.20250913
- [Commits](https://github.com/typeshed-internal/stub_uploader/commits)

Updates `types-s3transfer` from 0.12.0 to 0.16.0
- [Release notes](https://github.com/youtype/types-s3transfer/releases)
- [Commits](https://github.com/youtype/types-s3transfer/commits)

Updates `typing-extensions` from 4.13.2 to 4.15.0
- [Release notes](https://github.com/python/typing_extensions/releases)
- [Changelog](https://github.com/python/typing_extensions/blob/main/CHANGELOG.md)
- [Commits](python/typing_extensions@4.13.2...4.15.0)

Updates `werkzeug` from 3.1.3 to 3.1.4
- [Release notes](https://github.com/pallets/werkzeug/releases)
- [Changelog](https://github.com/pallets/werkzeug/blob/main/CHANGES.rst)
- [Commits](pallets/werkzeug@3.1.3...3.1.4)

Updates `xmltodict` from 0.14.2 to 1.0.2
- [Release notes](https://github.com/martinblech/xmltodict/releases)
- [Changelog](https://github.com/martinblech/xmltodict/blob/master/CHANGELOG.md)
- [Commits](martinblech/xmltodict@v0.14.2...v1.0.2)

Updates `alabaster` from 0.7.16 to 1.0.0
- [Release notes](https://github.com/sphinx-doc/alabaster/releases)
- [Changelog](https://github.com/sphinx-doc/alabaster/blob/master/docs/changelog.rst)
- [Commits](sphinx-doc/alabaster@0.7.16...1.0.0)

Updates `anyio` from 4.9.0 to 4.12.0
- [Release notes](https://github.com/agronholm/anyio/releases)
- [Commits](agronholm/anyio@4.9.0...4.12.0)

Updates `beautifulsoup4` from 4.13.4 to 4.14.3

Updates `cachecontrol` from 0.14.3 to 0.14.4
- [Release notes](https://github.com/psf/cachecontrol/releases)
- [Changelog](https://github.com/psf/cachecontrol/blob/master/docs/release_notes.rst)
- [Commits](psf/cachecontrol@v0.14.3...v0.14.4)

Updates `click` from 8.2.0 to 8.3.1
- [Release notes](https://github.com/pallets/click/releases)
- [Changelog](https://github.com/pallets/click/blob/main/CHANGES.rst)
- [Commits](pallets/click@8.2.0...8.3.1)

Updates `contourpy` from 1.3.2 to 1.3.3
- [Release notes](https://github.com/contourpy/contourpy/releases)
- [Changelog](https://github.com/contourpy/contourpy/blob/main/docs/changelog.rst)
- [Commits](contourpy/contourpy@v1.3.2...v1.3.3)

Updates `filelock` from 3.18.0 to 3.20.0
- [Release notes](https://github.com/tox-dev/py-filelock/releases)
- [Changelog](https://github.com/tox-dev/filelock/blob/main/docs/changelog.rst)
- [Commits](tox-dev/filelock@3.18.0...3.20.0)

Updates `fonttools` from 4.58.0 to 4.61.1
- [Release notes](https://github.com/fonttools/fonttools/releases)
- [Changelog](https://github.com/fonttools/fonttools/blob/main/NEWS.rst)
- [Commits](fonttools/fonttools@4.58.0...4.61.1)

Updates `furo` from 2024.8.6 to 2025.9.25
- [Release notes](https://github.com/pradyunsg/furo/releases)
- [Changelog](https://github.com/pradyunsg/furo/blob/main/docs/changelog.md)
- [Commits](pradyunsg/furo@2024.08.06...2025.09.25)

Updates `kiwisolver` from 1.4.8 to 1.4.9
- [Release notes](https://github.com/nucleic/kiwi/releases)
- [Changelog](https://github.com/nucleic/kiwi/blob/main/releasenotes.rst)
- [Commits](nucleic/kiwi@1.4.8...1.4.9)

Updates `matplotlib` from 3.10.3 to 3.10.8
- [Release notes](https://github.com/matplotlib/matplotlib/releases)
- [Commits](matplotlib/matplotlib@v3.10.3...v3.10.8)

Updates `mdit-py-plugins` from 0.4.2 to 0.5.0
- [Release notes](https://github.com/executablebooks/mdit-py-plugins/releases)
- [Changelog](https://github.com/executablebooks/mdit-py-plugins/blob/master/CHANGELOG.md)
- [Commits](executablebooks/mdit-py-plugins@v0.4.2...v0.5.0)

Updates `more-itertools` from 10.7.0 to 10.8.0
- [Release notes](https://github.com/more-itertools/more-itertools/releases)
- [Commits](more-itertools/more-itertools@v10.7.0...v10.8.0)

Updates `msgpack` from 1.1.0 to 1.1.2
- [Release notes](https://github.com/msgpack/msgpack-python/releases)
- [Changelog](https://github.com/msgpack/msgpack-python/blob/main/ChangeLog.rst)
- [Commits](msgpack/msgpack-python@v1.1.0...v1.1.2)

Updates `pillow` from 11.2.1 to 12.0.0
- [Release notes](https://github.com/python-pillow/Pillow/releases)
- [Changelog](https://github.com/python-pillow/Pillow/blob/main/CHANGES.rst)
- [Commits](python-pillow/Pillow@11.2.1...12.0.0)

Updates `platformdirs` from 4.3.8 to 4.5.1
- [Release notes](https://github.com/tox-dev/platformdirs/releases)
- [Changelog](https://github.com/tox-dev/platformdirs/blob/main/CHANGES.rst)
- [Commits](tox-dev/platformdirs@4.3.8...4.5.1)

Updates `pyparsing` from 3.2.3 to 3.2.5
- [Release notes](https://github.com/pyparsing/pyparsing/releases)
- [Changelog](https://github.com/pyparsing/pyparsing/blob/master/CHANGES)
- [Commits](pyparsing/pyparsing@3.2.3...3.2.5)

Updates `ruamel-yaml` from 0.18.10 to 0.18.16

Updates `ruamel-yaml-clib` from 0.2.12 to 0.2.15

Updates `soupsieve` from 2.7 to 2.8
- [Release notes](https://github.com/facelessuser/soupsieve/releases)
- [Commits](facelessuser/soupsieve@2.7...2.8)

Updates `sphinx` from 7.3.7 to 9.0.4
- [Release notes](https://github.com/sphinx-doc/sphinx/releases)
- [Changelog](https://github.com/sphinx-doc/sphinx/blob/v9.0.4/CHANGES.rst)
- [Commits](sphinx-doc/sphinx@v7.3.7...v9.0.4)

Updates `sphinx-autobuild` from 2024.10.3 to 2025.8.25
- [Release notes](https://github.com/sphinx-doc/sphinx-autobuild/releases)
- [Changelog](https://github.com/sphinx-doc/sphinx-autobuild/blob/main/NEWS.rst)
- [Commits](sphinx-doc/sphinx-autobuild@2024.10.03...2025.08.25)

Updates `sphinx-autodoc-typehints` from 2.3.0 to 3.6.0
- [Release notes](https://github.com/tox-dev/sphinx-autodoc-typehints/releases)
- [Commits](tox-dev/sphinx-autodoc-typehints@2.3.0...3.6.0)

Updates `sphinx-jinja2-compat` from 0.3.0 to 0.4.1
- [Release notes](https://github.com/sphinx-toolbox/sphinx-jinja2-compat/releases)
- [Commits](sphinx-toolbox/sphinx-jinja2-compat@v0.3.0...v0.4.1)

Updates `sphinx-prompt` from 1.8.0 to 1.10.2
- [Release notes](https://github.com/sbrunner/sphinx-prompt/releases)
- [Commits](sbrunner/sphinx-prompt@1.8.0...1.10.2)

Updates `sphinx-tabs` from 3.4.5 to 3.4.7
- [Release notes](https://github.com/executablebooks/sphinx-tabs/releases)
- [Changelog](https://github.com/executablebooks/sphinx-tabs/blob/master/CHANGELOG.md)
- [Commits](executablebooks/sphinx-tabs@v3.4.5...v3.4.7)

Updates `sphinx-toolbox` from 4.0.0 to 4.1.0
- [Release notes](https://github.com/sphinx-toolbox/sphinx-toolbox/releases)
- [Changelog](https://github.com/sphinx-toolbox/sphinx-toolbox/blob/master/doc-source/changelog.rst)
- [Commits](sphinx-toolbox/sphinx-toolbox@v4.0.0...v4.1.0)

Updates `sphinxext-opengraph` from 0.10.0 to 0.13.0
- [Release notes](https://github.com/sphinx-doc/sphinxext-opengraph/releases)
- [Commits](sphinx-doc/sphinxext-opengraph@v0.10.0...v0.13.0)

Updates `starlette` from 0.46.2 to 0.50.0
- [Release notes](https://github.com/Kludex/starlette/releases)
- [Changelog](https://github.com/Kludex/starlette/blob/main/docs/release-notes.md)
- [Commits](Kludex/starlette@0.46.2...0.50.0)

Updates `uvicorn` from 0.34.2 to 0.38.0
- [Release notes](https://github.com/Kludex/uvicorn/releases)
- [Changelog](https://github.com/Kludex/uvicorn/blob/main/docs/release-notes.md)
- [Commits](Kludex/uvicorn@0.34.2...0.38.0)

Updates `watchfiles` from 1.0.5 to 1.1.1
- [Release notes](https://github.com/samuelcolvin/watchfiles/releases)
- [Commits](samuelcolvin/watchfiles@v1.0.5...v1.1.1)

---
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- dependency-name: boto3-stubs
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- dependency-name: cffi
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- dependency-name: coverage
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- dependency-name: cryptography
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- dependency-name: freezegun
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- dependency-name: iniconfig
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- dependency-name: markupsafe
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- dependency-name: moto
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- dependency-name: mypy
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- dependency-name: mypy-boto3-s3
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- dependency-name: pycparser
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- dependency-name: ruff
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- dependency-name: types-awscrt
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- dependency-name: types-requests
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- dependency-name: types-s3transfer
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- dependency-name: typing-extensions
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- dependency-name: werkzeug
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- dependency-name: kiwisolver
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- dependency-name: sphinxext-opengraph
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- dependency-name: uvicorn
  dependency-version: 0.38.0
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  update-type: version-update:semver-minor
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- dependency-name: watchfiles
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  update-type: version-update:semver-minor
  dependency-group: py-updates
...

Signed-off-by: dependabot[bot] <[email protected]>
@dependabot dependabot bot added dependencies Pull requests that update a dependency file python Pull requests that update python code labels Dec 15, 2025
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dependabot bot commented on behalf of github Jan 12, 2026

Looks like these dependencies are updatable in another way, so this is no longer needed.

@dependabot dependabot bot closed this Jan 12, 2026
@dependabot dependabot bot deleted the dependabot/pip/py-updates-e4e420a752 branch January 12, 2026 04:36
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