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@sagc-bioinformatics

SAGC - Bioinformatics

South Australian Genomics Centre

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  1. mgikit mgikit Public

    mgikit is a collection of tools used to demultiplex fastq files and generate demultiplexing and quality reports.

    Rust 17 1

  2. SAGC_5mCMethylation_tutorial SAGC_5mCMethylation_tutorial Public

    WGBS tutorial

    HTML 3 4

  3. nextflow-vs-snakemake-2024 nextflow-vs-snakemake-2024 Public

    A homepage for our 2024 bioinformatics workflow managers workshop.

    HTML 3 2

  4. modules modules Public

    Module files for Nextflow workflows

    Nextflow 2 4

  5. nf-rnaseq-sagc nf-rnaseq-sagc Public

    RNAseq quantification pipeline

    Nextflow 2 2

  6. mgikit-multiqc mgikit-multiqc Public

    MultiQC plugin to parse and integrate reports generated by mgikit demultiplexer

    Python 2 1

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