Culling packages

recipes/mne-python/construct.yaml

@@ -51,177 +51,74 @@ menu_packages:
 
 channels:
   - conda-forge
-  # TODO: ⛔️ ⛔️ ⛔️ DEV BUILDS START: COMMENT OUT BEFORE RELEASE! ⛔️ ⛔️ ⛔️
-  # - conda-forge/label/mne_dev
-  # - conda-forge/label/mne-bids_dev
-  # TODO: ⛔️ ⛔️ ⛔️ DEV BUILDS STOP: COMMENT OUT BEFORE RELEASE! ⛔️ ⛔️ ⛔️
 specs:
   # Python
   - python =3.13.3  # [not (osx and arm64)]
   - python =3.13.2  # [osx and arm64]  # allow_outdated
   - pip =25.1.1
   - wheel =0.45.1
   - conda =25.3.1
-  - mamba =2.1.0
-  # MNE ecosystem
-  # TODO: ⛔️ ⛔️ ⛔️ DEV BUILDS START: CHANGE BEFORE RELEASE! ⛔️ ⛔️ ⛔️
-  # - mne-base =1.4dev0=*_20230503
-  # - mne-installer-menus =1.4dev0=*_20230503
-  # - mne-bids =0.11dev0=*_20221007
-  # TODO: ⛔️ ⛔️ ⛔️ DEV BUILDS STOP: CHANGE BEFORE RELEASE! ⛔️ ⛔️ ⛔️
-  - mne =1.9.0=pyside6_*_100
-  - mne-installer-menus =1.9.0=*_100
-  # For testing purposes with build_local.sh, you can comment out all deps
-  # below for speed, and change mne to mne-base above
-
-  # vvv this line is special and used by MNE-Python, do not change it!
-  # <<< BEGIN RELATED SOFTWARE LIST >>>
-  - mne-bids =0.16.0
-  - mne-bids-pipeline =1.9.0
-  - mne-qt-browser =0.7.1
-  - mne-connectivity =0.7.0=*_1
-  - mne-faster =1.2.2
-  - mne-nirs =0.7.1
-  - mne-features =0.3
-  - mne-rsa =0.9.1
-  - mne-ari =0.1.2
-  - mne-icalabel =0.7.0
-  - mne-gui-addons =0.1=*_1
-  - mne-lsl =1.9.0
-  - mne-kit-gui =1.3.0
-  - autoreject =0.4.3
-  - antio =0.5.0
-  - wfdb =4.3.0
-  - meegkit =0.1.9
-  - eeg_positions =2.1.2
-  # MRI
-  - fsleyes =1.14.2
-  - dcm2niix =1.0.20241211
-  - dipy =1.11.0
-  # Time-frequency analysis
-  - pactools =0.3.1
-  - tensorpac =0.6.5
-  - emd =0.8.1
-  - neurodsp =2.3.0
-  - bycycle =1.1.0
-  - fooof =1.1.1
-  # Microstates
-  - mne-microstates =0.3.0
-  - pycrostates =0.6.1
-  # OpenNeuro.org data access
-  - openneuro-py =2024.2.0
-  # sleep staging
-  - sleepecg =0.5.9=*_2
-  - yasa =0.6.5
-  # various biological signals (ECG, EOG, EMG, …)
-  - neurokit2 =0.2.10
-  - mnelab =1.0.0
-  # other
-  - pyriemann =0.8
-  - pyprep =0.4.3=*_1
-  - python-picard =0.8
-  - pybv =0.7.6
-  - edfio =0.4.7  # allow_outdated, for some reason 0.4.8 won't download
-  - eeglabio =0.0.3
-  - mffpy =0.10.0
-  - openmeeg =2.5.15
-  - python-neo =0.14.1
-  - nitime =0.11
-  - snirf =0.8.0
-  - alphacsc =0.4.1
-  # Not on PyPI or no wheels on PyPI
-  # conpy: https://aaltoimaginglanguage.github.io/conpy/
-  # posthoc: https://users.aalto.fi/~vanvlm1/posthoc/python/
-  # eelbrain: https://eelbrain.readthedocs.io/en/stable/index.html
-  # Not on conda-forge
-  # niseq: https://github.com/john-veillette/niseq
-  # sesameeg: https://pybees.github.io/sesameeg
-  # invertmeeg: https://github.com/LukeTheHecker/invert
-  # Meggie: https://github.com/cibr-jyu/meggie
-  # MEM: https://github.com/multifunkim/best-python
-  # <<< END RELATED SOFTWARE LIST >>>
-  # ^^^ this line is special and used by MNE-Python, do not change it!
-
-  - antropy =0.1.9
-  - mayavi =4.8.2=pyside6_*
-  - traitsui =8.0.0
-  - pyface =8.0.0=*_1
-  - imageio-ffmpeg =0.6.0
-  - pandas =2.2.3
-  - polars =1.27.1
+  - mamba =2.1.1
+  # Scientific Python
   - scipy =1.15.2
   - numpy =2.1.3  # allow_outdated, each new version has to wait for numba
   - openblas =0.3.28  # allow_outdated, NumPy etc. need to update
   - libblas =3.9.0=*openblas
+  # Web
+  - requests =2.32.3
+  # Data science and statistics.
+  - pandas =2.2.3
+  - polars =1.29.0
+  - scikit-learn =1.6.1
+  - statsmodels =0.14.4
+  # https://pingouin-stats.org
+  - pingouin =0.5.5
+  # Jupyter
   - jupyter =1.1.1
   - jupyterlab =4.4.1
+  - nbclassic =1.3.1
   - ipykernel =6.29.5
   - spyder-kernels =3.0.3
   # TODO: Needs to not require pyqt
   # https://github.com/spyder-ide/spyder/issues/20201
   # spyder =6.1.0
-  - darkdetect =0.8.0
-  - qdarkstyle =3.2.3
-  - numba =0.61.2
-  - cython =3.0.12
   # I/O
-  - pyxdf =1.17.0
   - openpyxl =3.1.5
   - xlrd =2.0.1
-  # Statistics
-  - pingouin =0.5.5
-  # NeuroSpin needs the following
-  - questionary =2.1.0
-  - pqdm =0.2.0
-  - astropy =7.0.1
+  # https://github.com/Roche/pyreadstat
+  - pyreadstat =1.2.8
+  # Image processing
+  - scikit-image =0.25.2
+  - pillow =11.2.1
+  # Data
+  - pooch =1.8.2
+  # Symbolic math
+  - sympy =1.14.0
   # Viz
   # matplotilb is just matplotlib-base, tornado, and pyqt
   # https://github.com/conda-forge/matplotlib-feedstock/blob/main/recipe/meta.yaml
-  - matplotlib-base =3.10.1
+  - matplotlib-base =3.10.3
   - tornado =6.4.2
   - pyside6 =6.8.2  # allow_outdated, PyVista (VTK 9.3.1) and Mayavi
   - qt6-main =6.8.2  # allow_outdated
   - ipympl =0.9.7
   - qtpy =2.4.3
   - seaborn =0.13.2
   - plotly =6.0.1
-  # PyVista doesn't yet support VTK 9.4
-  - vtk =9.3.1=qt*  # allow_outdated
   - ipywidgets =8.1.7
-  - pyvista =0.45.0
-  - pyvistaqt =0.11.2
-  - trame =3.9.0
-  - trame-vtk =2.8.15
-  - trame-vuetify =3.0.1
   - termcolor =3.1.0
+  # https://github.com/tiran/defusedxml
   - defusedxml =0.7.1
   # Development
-  - gh =2.72.0
-  - setuptools_scm =8.3.1
+  - cython =3.1.0
   - pytest =8.3.5
-  - pytest-cov =6.1.1
-  - pytest-qt =4.4.0
-  - pytest-timeout =2.3.1
+  - pytest-timeout =2.4.0
   - pre-commit =4.2.0
-  - ruff =0.11.8
-  - uv =0.7.2
-  - check-manifest =0.50
-  - codespell =2.4.1
-  - py-spy =0.4.0
-  - line_profiler =4.2.0
-  - memory_profiler =0.61.0
-  - twine =6.1.0
-  - hatchling =1.27.0
-  - hatch-vcs =0.4.0
-  - mypy =1.15.0
-  - towncrier =24.8.0
-  - vulture =2.14
+  - ruff =0.11.9
+  - uv =0.7.3
   # Doc building
   - numpydoc =1.8.0
   - pydata-sphinx-theme =0.16.1
-  - graphviz =12.2.1
-  - python-graphviz =0.20.3
-  - selenium =4.32.0
   - sphinx =8.2.3
   - sphinx-design =0.6.1
   - sphinx-gallery =0.19.0

tests/test_gui.py

@@ -3,14 +3,10 @@
 
 faulthandler.enable()
 
-import os
 from pathlib import Path
 
-import numpy as np
 import matplotlib.pyplot as plt
-import pyvista
 
-import mne
 
 this_path = Path(__file__).parent
 
@@ -20,49 +16,3 @@
 want = "QTAgg"
 assert want in repr(fig.canvas), repr(fig.canvas)
 plt.close("all")
-
-# pyvistaqt
-if os.getenv("SKIP_PYVISTAQT_TESTS", "").lower() in ("1", "true"):
-    print("Skipping PyVistaQt tests")
-else:
-    print("Running pyvistaqt tests")
-    fname = this_path / "test.png"
-    mne.viz.set_3d_backend("pyvista")
-    fig = mne.viz.create_3d_figure((400, 400), scene=False, show=True)
-    fig._process_events()
-    fig._process_events()
-    plotter = fig.figure.plotter
-    plotter.add_orientation_widget(pyvista.Cube())  # Old test without color='b'
-    plotter.add_mesh(pyvista.Cube(), render=True)
-    if fname.is_file():
-        os.remove(fname)
-    assert not fname.is_file()
-    fig._process_events()
-    plotter.screenshot(fname)
-    assert fname.is_file()
-    os.remove(fname)
-    assert "BackgroundPlotter" in repr(plotter), repr(plotter)
-    mne.viz.close_3d_figure(fig)
-
-# mne-qt-browser
-print("Running mne-qt-browser tests")
-mne.viz.set_browser_backend("qt")
-raw = mne.io.RawArray(np.zeros((1, 1000)), mne.create_info(1, 1000.0, "eeg"))
-fig = raw.plot()
-fig.close()
-assert "MNEQtBrowser" in repr(fig), repr(fig)
-
-# mne-kit-gui
-if os.getenv("SKIP_MNE_KIT_GUI_TESTS", "").lower() in ("1", "true"):
-    print("Skipping MNE-KIT-GUI tests")
-else:
-    print("Running MNE-KIT-GUI tests")
-    from pyface.api import GUI  # noqa
-    import mne_kit_gui  # noqa
-
-    os.environ["_MNE_GUI_TESTING_MODE"] = "true"
-    gui = GUI()
-    gui.process_events()
-    ui, frame = mne_kit_gui.kit2fiff()
-    assert not frame.model.can_save
-    ui.dispose()