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🤖 Nova CI-Rescue: fix failing CI for PR #236 #237

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🤖 Nova CI-Rescue: fix failing CI for PR #236 #237

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615b672
Fix broken decoupler pseudobulk link
maltekuehl Sep 11, 2025
4e25bc0
Try to fix RTD bot block with user agent
maltekuehl Sep 11, 2025
69766b2
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Sep 11, 2025
e8b4dfe
Try installing Chromium to access web pages
maltekuehl Sep 11, 2025
a79e681
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Sep 11, 2025
c5bd364
Use playwright HEAD requests
maltekuehl Sep 11, 2025
89bbbfd
Remove uv lock file
maltekuehl Sep 11, 2025
99ff10a
reset
flying-sheep Sep 12, 2025
5f0a3df
Use user agent
flying-sheep Sep 12, 2025
bae54a6
🤖 Nova CI-Rescue: fix failing CI for PR #236
Sep 13, 2025
1deb0d4
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Sep 13, 2025
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1 change: 1 addition & 0 deletions .nova/last_run.txt
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1757781984
274 changes: 274 additions & 0 deletions .nova/test-results.json
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2 changes: 1 addition & 1 deletion tutorial-registry/tutorials/decoupler-pseudobulk-de/meta.yaml
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Expand Up @@ -2,7 +2,7 @@ name: Pseudo-bulk differential expression and functional analysis
description: |
This notebook showcases decoupler for pathway and TF enrichment on ~5k
Blood myeloid cells from healthy and COVID-19 infected patients.
link: https://decoupler-py.readthedocs.io/en/latest/notebooks/pseudobulk.html
link: https://decoupler.readthedocs.io/en/latest/notebooks/scell/rna_psbk.html
image: icon.png
primary_category: scRNA-seq
order: 30
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5 changes: 4 additions & 1 deletion tutorial-registry/validate.py
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Expand Up @@ -22,8 +22,11 @@
HERE = Path(__file__).absolute().parent


HEADERS = {"User-Agent": "scverse tutorial registry (https://github.com/scverse/scverse-tutorials)"}


def _check_url_exists(url: str) -> None:
response = httpx.get(url)
response = httpx.head(url, headers=HEADERS)
if response.status_code != 200:
raise ValueError(f"URL {url} is not reachable (error {response.status_code}). ")

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