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slebedeva/README.md

Hi 👋, I'm Svetlana

An RNA biologist who likes to code

  • 🔭 I’m currently working on predicting RNA stability

  • 🌱 I’m currently learning Transformers

  • 👯 I’m looking to collaborate on ML projects in Bio

  • 💬 Ask me about RNA

  • 📄 Know about my experiences

  • ⚡ Fun fact known cat lover

Connect with me:

svet_lebedeva svetlana-s-lebedeva

Languages and Tools:

docker gcp pandas python scikit_learn seaborn sqlite tensorflow

slebedeva

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  1. rosalind rosalind Public

    Simple functions to solve Rosalind problems

    Python

  2. personal-genome personal-genome Public

    Scripts and notebooks to analyze my own genome sequence.

    Jupyter Notebook

  3. ohlerlab/clip_pipeline ohlerlab/clip_pipeline Public

    CLIP pipeline

    Python 2

  4. CPEB4_public CPEB4_public Public

    Code to create figures for the CPEB4 manuscript (10.1186/s13059-022-02760-5).

    R 1

  5. zebrafish-tissue-expression zebrafish-tissue-expression Public

    R shiny app to show gene expression in zebrafish tissues

    R 1 1

  6. crispr-rhapsody crispr-rhapsody Public

    A workflow to process single-cell readout of CRISPR screen performed on BD Rhapsody system

    R