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@statgen

Center for Statistical Genetics

The Center for Statistical Genetics at the University of Michigan School of Public Health

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  1. pheweb pheweb Public

    A tool to build a website to browse hundreds or thousands of GWAS.

    Python 188 74

  2. locuszoom locuszoom Public

    A Javascript/d3 embeddable plugin for interactively visualizing statistical genetic data from customizable sources.

    JavaScript 163 30

  3. demuxlet demuxlet Public

    Genetic multiplexing of barcoded single cell RNA-seq

    C++ 130 26

  4. SLURM-examples SLURM-examples Public

    Python 94 28

  5. bamUtil bamUtil Public

    C++ 92 30

  6. Minimac4 Minimac4 Public

    C++ 71 25

Repositories

Showing 10 of 117 repositories
  • bravo_data_prep Public

    Work flows and tools to create data that backs the BRAVO API.

    statgen/bravo_data_prep’s past year of commit activity
    C++ 0 MIT 2 8 0 Updated Nov 18, 2025
  • colocus Public

    A browser for display of fine-mapped genetic signals and their colocalizations

    statgen/colocus’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Nov 18, 2025
  • cloudgene3 Public Forked from genepi/cloudgene3

    A framework to build Software As A Service (SaaS) platforms for Nextflow pipelines.

    statgen/cloudgene3’s past year of commit activity
    Java 0 MIT 7 0 0 Updated Nov 18, 2025
  • tis-v2-docs Public

    User-facing documentation for the TOPMed Imputation Server v2 (Nextflow edition)

    statgen/tis-v2-docs’s past year of commit activity
    0 0 0 0 Updated Nov 18, 2025
  • encore Public

    Encore Analysis Server

    statgen/encore’s past year of commit activity
    Python 13 AGPL-3.0 6 0 5 Updated Nov 18, 2025
  • colocus-ui-vue3 Public
    statgen/colocus-ui-vue3’s past year of commit activity
    JavaScript 0 0 0 1 Updated Nov 17, 2025
  • imputationserver2 Public Forked from genepi/imputationserver2

    Imputation Server 2 workflow to facilitate genotype imputation at scale.

    statgen/imputationserver2’s past year of commit activity
    Nextflow 0 MIT 12 0 0 Updated Nov 15, 2025
  • imputationserver-utils Public Forked from genepi/imputationserver-utils
    statgen/imputationserver-utils’s past year of commit activity
    Java 0 MIT 4 0 0 Updated Nov 14, 2025
  • imputationserver Public Forked from genepi/imputationserver

    TOPMED Imputation Server: A new web-based service for imputation that facilitates access to new reference panels and greatly improves user experience and productivity

    statgen/imputationserver’s past year of commit activity
    Java 6 AGPL-3.0 50 0 0 Updated Oct 20, 2025
  • topmed-methylation-qtl Public

    PIpeline for TOPMed methylation QTL analysis.

    statgen/topmed-methylation-qtl’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 11, 2025
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