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@sysbiolab

Bioinformatics and Systems Biology Laboratory

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  1. RGraphSpace RGraphSpace Public

    A lightweight package for representing large igraph objects in a normalized coordinate system

    R 2

  2. PathwaySpace PathwaySpace Public

    PathwaySpace is an R package that creates landscape images from graphs containing vertices (nodes), edges (lines), and a signal associated with the vertices.

    R 3 2

  3. RedeR RedeR Public

    RedeRis a stand-alone Java application for interactive visualization and manipulation of nested networks.

  4. RTN RTN Public

    Reconstruction of Transcriptional regulatory Networks and analysis of regulons

  5. GeneBridge GeneBridge Public

    Rooting Orthologous Genes in Large-Scale Evolutionary Analysis.

    R 7 2

  6. TreeAndLeaf TreeAndLeaf Public

    An R package for displaying binary trees, aiming to represent multiple layers of information on dendrogram leaves.

    R 13 3

Repositories

Showing 10 of 11 repositories
  • PathwaySpace Public

    PathwaySpace is an R package that creates landscape images from graphs containing vertices (nodes), edges (lines), and a signal associated with the vertices.

    sysbiolab/PathwaySpace’s past year of commit activity
    R 3 2 0 0 Updated Oct 15, 2025
  • RGraphSpace Public

    A lightweight package for representing large igraph objects in a normalized coordinate system

    sysbiolab/RGraphSpace’s past year of commit activity
    R 2 0 0 0 Updated Oct 8, 2025
  • SpotSpace Public
    sysbiolab/SpotSpace’s past year of commit activity
    R 0 0 0 0 Updated Oct 7, 2025
  • RedeR Public

    RedeRis a stand-alone Java application for interactive visualization and manipulation of nested networks.

    sysbiolab/RedeR’s past year of commit activity
    0 0 0 0 Updated Sep 18, 2025
  • RTN Public

    Reconstruction of Transcriptional regulatory Networks and analysis of regulons

    sysbiolab/RTN’s past year of commit activity
    0 0 0 0 Updated Sep 18, 2025
  • TreeAndLeaf Public

    An R package for displaying binary trees, aiming to represent multiple layers of information on dendrogram leaves.

    sysbiolab/TreeAndLeaf’s past year of commit activity
    R 13 3 2 0 Updated Sep 18, 2025
  • hexcore-project Public
    sysbiolab/hexcore-project’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jul 9, 2025
  • neuriteScan Public

    An R Package for neurite image analysis.

    sysbiolab/neuriteScan’s past year of commit activity
    HTML 1 1 0 0 Updated Feb 6, 2025
  • alphafold Public Forked from google-deepmind/alphafold

    Open source code for AlphaFold.

    sysbiolab/alphafold’s past year of commit activity
    Python 0 Apache-2.0 2,510 0 0 Updated Jun 27, 2024
  • GeneBridge Public

    Rooting Orthologous Genes in Large-Scale Evolutionary Analysis.

    sysbiolab/GeneBridge’s past year of commit activity
    R 7 2 1 0 Updated Jan 21, 2024
View all repositories

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