R Programming for HPC

Workshop materials for R Programming for HPC.

An overview of R programming for HPC. Topics include parallel programming, memory efficiency, data I/O, as well as profiling and benchmarking. Assumes basic proficiency in R programming.

Slides: https://uschpc.github.io/workshop-r-hpc/

Learning objectives:

• Explain HPC concepts
• Develop and run parallel R code
• Identify and use HPC-oriented R packages
• Profile and benchmark R code
• Use R on CARC HPC clusters

Additional resources

• R Project
• R Manuals
• R package documentation
• R cheatsheets
• CRAN Task View on High-Performance and Parallel Computing with R
• HPCRAN
• Programming with Big Data in R
• Futureverse
• Fastverse
• rOpenSci
• Bioconductor

Web books:

• The R Inferno
• Advanced R
• Efficient R Programming