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1. amino-acid-personality-framework amino-acid-personality-framework Public

   A pedagogical framework using amino acid chemistry as a bidirectional personality metaphor for understanding protein design, enzyme engineering, and team architecture.

2. AATI AATI Public

   A personality typology built from real amino acid biochemistry — 20 types across 6 dimensions (hydropathy, charge, volume, aromaticity, flexibility, bond strength), each grounded in actual physicoc…

   HTML

3. amino-acid-property-explorer amino-acid-property-explorer Public

   Visualize amino acid physicochemical properties along a protein sequence: hydropathy plots, composition radar charts, and point-mutation delta reports, from the command line.

   Python

4. cpg-island-finder cpg-island-finder Public

   Detects CpG islands in DNA sequences using the standard Gardiner-Garden & Frommer criteria (GC content, observed/expected CpG ratio, minimum length), with visualization of GC content and CpG densit…

   Python

5. msp-primer-designer msp-primer-designer Public

   Designs methylation-specific PCR (MSP) primers from a genomic DNA sequence. Simulates bisulfite conversion for methylated and unmethylated alleles, then proposes allele-discriminating primer pairs …

   Python