New Mexico Unified Water Data: Data Integration Engine

This package provides a command line interface to New Mexico Water Data Initiaive's Data Integration Engine. This tool is used to integrate the water data from multiple sources.

Installation

pip install nmuwd

Sources

Data comes from the following sources. We are continuously adding new sources as we learn of them and they become available. If you have data that you would like to be part of the Data Integration Engine please get in touch at [email protected].

• Bernalillo County (BernCo)
  • Available data: water levels
• Bureau of Reclamation (BoR)
  • Available data: water quality
• City of Albuquerque (CABQ)
  • Available data: water levels
• Elephant Butte Irrigation District (EBID)
  • Available data: water levels
• New Mexico Bureau of Geology and Mineral Resources (NMBGMR) Aquifer Mapping Program (AMP)
  • Available data: water levels, water quality
• New Mexico Environment Department Drinking Water Bureau (NMED DWB)
  • Available data: water quality
• New Mexico Office of the State Engineer Points of Diversions (NMOSEPODs)
  • Available data: None
• New Mexico Office of the State Engineer ISC Seven Rivers (NMOSE ISC Seven Rivers)
  • Available data: water levels, water quality
• New Mexico Office of the State Engineer Roswell District Office (NMOSE Roswell)
  • Available data: water levels
• Pecos Valley Artesian Conservancy District (PVACD)
  • Available data: water levels
• USGS (NWIS)
  • Available data: water levels
• Water Quality Portal (WQP)
  • Available data: water levels, water quality

Usage

Parameter Data

To obtain parameter summary or time series data, use

die weave {parameter}

where {parameter} is the name of the parameter whose data is to be retrieved, followed by the desired output type, excluded data sources, date filters, and geographic filters. {parameter} is case-insensitive.

Available Parameters

	waterlevels	arsenic	bicarbonate	calcium	carbonate	chloride	fluoride	magnesium	nitrate	ph	potassium	silica	sodium	sulfate	tds	uranium
bernco	X	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
bor	-	X	-	X	-	X	X	X	X	X	X	X	X	X	X	X
cabq	X	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
ebid	X	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
nmbgmr-amp	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X
nmed-dwb	-	X	X	X	-	X	X	X	X	X	X	X	X	X	X	X
nmose-isc-seven-rivers	X	-	X	X	-	X	X	X	X	X	X	X	X	X	X	-
nmose-pod	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
nmose-roswell	X	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
nwis	X	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
pvacd	X	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
wqp	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X*	X

^{*TDS data from WQP may contain duplicates. Duplicates are identified when they have the same ActivityIdentifier. If duplicates are identified, only one is kept as identified by its USGS pCode. The order of preference for the pCodes is: 70300, 70301, 70303.}

Output Type

The --output-type option is required and used to set the output type:

--output-type summary

• A summary table consisting of location information as well as summary statistics for the parameter of interest for every location that has observations.

--output-type timeseries_unified

• A single table consisting of time series data for all locations for the parameter of interest.
• A single table of site data that contains information such as latitude, longitude, and elevation

--output-type timeseries_separated

• Separate time series tables for all locations for the parameter of interest.
• A single table of site data that contains information such as latitude, longitude, and elevation

The data is saved to a directory titled output in the current working directory. If the directory output already exists, then the output directory will be called output_1. If enumerated output directories already exist, then the output directory will be called output_{n} where n is equal to the greatest existing integer suffix +1.

A log of the inputs and processes, called die.log, is also saved to the output directory.

Summary Table

field/header	description	data type	always present
source	the organization/source for the site	string	Y
id	the id of the site. The id is used as the key to join the site and timeseries tables	string	Y
name	the colloquial name for the site	string	Y
usgs_site_id	USGS site id	string	N
alternate_site_id	alternate site id	string	N
latitude	latitude in decimal degrees	float	Y
longitude	longitude in decimal degrees	float	Y
horizontal_datum	horizontal datum of the latitude and longitude. Defaults to WGS84	string	Y
elevation*	ground surface elevation of the site	float	Y
elevation_units	the units of the ground surface elevation. Defaults to ft	string	Y
well_depth	depth of well	float	N
well_depth_units	units of well depth. Defaults to ft	string	N
parameter_name	the name of the parameter whose measurements are reported in the table	string	Y
parameter_units	units of the observation	string	Y
nrecords	number of records at the site for the parameter	integer	Y
min	the minimum observation	float	Y
max	the maximum observation	float	Y
mean	the mean value of the observations	float	Y
earliest_date	date of the earliest record in YYYY-MM-DD	string	Y
earliest_time	time of the earliest record in HH:MM:SS or HH:MM:SS.mmm	string	N
earliest_value	value of the earliest recent record	float	Y
earliest_units	units of the earliest record	string	Y
latest_date	date of the latest record in YYYY-MM-DD	string	Y
latest_time	time of the latest record in HH:MM:SS or HH:MM:SS.mmm	string	N
latest_value	value of the latest recent record	float	Y
latest_units	units of the latest record	string	Y

^{*CABQ elevation is calculated as [elevation at top of casing] - [stickup height]; if stickup height < 0 the measuring point is assumed to be beneath the ground surface}

Sites Table

field/header	description	data type	always present
source	the organization/source for the site	string	Y
id	the id of the site. The id is used as the key to join the site and timeseries tables	string	Y
name	the colloquial name for the site	string	Y
latitude	latitude in decimal degrees	float	Y
longitude	longitude in decimal degrees	float	Y
elevation**	ground surface elevation of the site	float	Y
elevation_units	the units of the ground surface elevation. Defaults to ft	string	Y
horizontal_datum	horizontal datum of the latitude and longitude. Defaults to WGS84	string	Y
vertical_datum	vertical datum of the elevation	string	N
usgs_site_id	USGS site id	string	N
alternate_site_id	alternate site id	string	N
formation	geologic formation in which the well terminates	string	N
aquifer	aquifer from which the well draws water	string	N
well_depth	depth of well	float	N
well_depth_units	units of well depth. Defaults to ft	string	N

^{**CABQ elevation is calculated as [elevation at top of casing] - [stickup height]; if stickup height < 0 the measuring point is assumed to be beneath the ground surface}

Time Series Table(s)

field/header	description	data type	always present
source	the organization/source for the site	string	Y
id	the id of the site. The id is used as the key to join the site and timeseries tables	string	Y
parameter_name	the name of the parameter whose measurements are reported in the table	string	Y
parameter_value	value of the observation	float	Y
parameter_units	units of the observation	string	Y
date_measured	date of measurement in YYYY-MM-DD	string	Y
time_measured	time of measurement in HH:MM:SS or HH:MM:SS.mmm	string	N
source_parameter_name	the name of the parameter from the source	string	Y
source_parameter_units	the unit of measurement from the source	string	Y
conversion_factor	the factor applied to the result to convert the measurement to standardized units	float or int	Y

Output Format

The --output-format option is used to determine the file format for the summary and sites tables. The available options are csv and geojson. If not specified, it defaults to csv.

Source Inclusion & Exclusion

The Data Integration Engine enables the user to obtain groundwater level and groundwater quality data from a variety of sources. Data from sources are automatically included in the output if available unless specifically excluded. The following flags are available to exclude specific data sources:

• --no-bernco to exclude Bernalillo County (BernCo) data
• --no-bor to exclude Bureau of of Reclamation (Bor) data
• --no-cabq to exclude City of Albuquerque (CABQ) data
• --no-ebid to exclude Elephant Butte Irrigation District (EBID) data
• --no-nmbgmr-amp to exclude New Mexico Bureau of Geology and Mineral Resources (NMBGMR) Aquifer Mapping Program (AMP) data
• --no-nmed-dwb to exclude New Mexico Environment Department (NMED) Drinking Water Bureau (DWB) data
• --no-nmose-isc-seven-rivers to exclude New Mexico Office of State Engineer (NMOSE) Interstate Stream Commission (ISC) Seven Rivers data
• --no-nmose-pod to exclude New Mexico Office of State Engineer (NMOSE) Point of Diversion (POD) data (though none except for well information is currently available)
• --no-nmose-roswell to exclude New Mexico Office of State Engineer (NMOSE) Roswell data
• --no-nwis to exclude USGS NWIS data
• --no-pvacd to exclude Pecos Valley Artesian Convservancy District (PVACD) data
• --no-wqp to exclude Water Quality Portal (WQP) data

Geographic Filters [In Development]

The following flags can be used to geographically filter data:

-- county {county name}

-- bbox 'x1 y1, x2 y2'

-- wkt {wkt polygon or multipolygon}

Date Filters [In Development]

The following flags can be used to filter by dates:

--start-date YYYY-MM-DD 

--end-date YYYY-MM-DD

Source Enumeration [In Development]

Use

die sources {parameter}

to print the sources that report that parameter to the terminal.

Sites

Use

die sites

to export site information only