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Merged
juliawu merged 4 commits into from
Mar 20, 2026
Merged

Automated Integration Test Goldens Update from CI #6106

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cef350a
feat: Update goldens from Cloud Build workflow (build 7e53d964-9be8-4…
datacommons-robot-author Mar 19, 2026
7e90631
Merge branch 'master' into nl-golden-update-7e53d964-9be8-434a-ba13-1…
juliawu Mar 20, 2026
14f3174
remove test_detection_bio
juliawu Mar 20, 2026
3da27b7
Revert stateswithhighestphds change
juliawu Mar 20, 2026
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8 changes: 0 additions & 8 deletions server/integration_tests/explore_test.py
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Original file line number Diff line number Diff line change
Expand Up @@ -321,14 +321,6 @@ def test_detection_basic_sfr(self):
def test_detection_sdg(self):
self.run_detection('detection_api_sdg', ['Health in USA'], dc='sdg')

def test_detection_bio(self):
self.run_detection('detection_api_bio', [
'What is the phylum of volvox?',
'What types of genes are FGFR1, APOE, and ACHE?',
],
dc='bio',
check_detection=True)

Comment on lines -324 to -331
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@juliawu juliawu Mar 20, 2026

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@shixiao-coder In order to get NL tests to pass, I'm seeing I need to remove this test -- we've removed the bio BT tables, so I think this is the right change to make.

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@shixiao-coder shixiao-coder Mar 20, 2026

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yep, agreed

def test_detection_multivar(self):
self.run_detection(
'detection_api_multivar',
Expand Down
138 changes: 11 additions & 127 deletions server/integration_tests/test_data/detection_api_bio/whatisthephylumofvolvox/debug_info.json
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Expand Up @@ -3,149 +3,33 @@
"places_resolved": "",
"main_place_dcid": "<None>",
"main_place_name": "<None>",
"entities_detected": [
"volvox"
],
"entities_resolved": "(name: Volvox, dcid: bio/D044446); (name: Volvox, dcid: bio/Volvox); ",
"query_with_places_removed": "what is the phylum of",
"entities_detected": [],
"entities_resolved": "",
"query_with_places_removed": "",
"sv_matching": {
"CosineScore": [
0.35511,
0.34609,
0.34526,
0.34485,
0.34114,
0.3385,
0.33499,
0.33166,
0.32601,
0.32424,
0.32061,
0.31427,
0.31277,
0.31263,
0.3125,
0.31177,
0.31034,
0.31007,
0.30988,
0.30805,
0.30746,
0.3072,
0.30394
],
"CosineScore": [],
"MultiSV": {},
"Query": "what is the phylum of",
"SV": [
"dc/topic/SDGBiodiversity",
"Count_Person_5OrMoreYears_OtherIndicLanguagesSpokenAtHome",
"Annual_Amount_Emissions_Phenol_SCC_28_MiscellaneousAreaSources",
"Annual_Amount_Emissions_Phenol_SCC_3_IndustrialProcesses",
"Annual_Amount_Emissions_Phenol_SCC_26_WasteDisposalTreatmentAndRecovery",
"Count_Person_5OrMoreYears_GreekSpokenAtHome",
"Annual_Amount_Emissions_Phenol_SCC_23_IndustrialProcesses",
"Amount_FarmInventory_SorghumForSilageOrGreenchop",
"Count_Person_5OrMoreYears_PersianInclFarsiDariSpokenAtHome",
"Count_Person_SpeakEnglishLessThanVeryWell_5OrMoreYears_PersianSpokenAtHome",
"Count_Farm_SorghumForSilageOrGreenchop",
"Annual_Amount_Emissions_Phenol_SCC_22_MobileSources",
"Count_Person_SpeakEnglishLessThanVeryWell_5OrMoreYears_PersianInclFarsiDariSpokenAtHome",
"Amount_FarmInventory_BarleyForGrain",
"Count_Person_5OrMoreYears_OtherAndUnspecifiedLanguagesSpokenAtHome",
"Count_Person_5OrMoreYears_MalayalamKannadaOrOtherDravidianLanguagesSpokenAtHome",
"Amount_FarmInventory_DurumWheatForGrain",
"Count_Person_SpeakEnglishVeryWell_5OrMoreYears_PersianInclFarsiDariSpokenAtHome",
"Count_Person_SpeakEnglishVeryWell_5OrMoreYears_MalayalamKannadaOrOtherDravidianLanguagesSpokenAtHome",
"Count_Person_SpeakEnglishVeryWell_5OrMoreYears_GreekSpokenAtHome",
"Annual_Amount_Emissions_Phenol_SCC_2_InternalCombustionEngines",
"Amount_FarmInventory_CornForSilageOrGreenchop",
"Count_Person_5OrMoreYears_OtherSlavicLanguagesSpokenAtHome"
]
"Query": "What is the phylum of volvox?",
"SV": []
},
"props_matching": {
"CosineScore": [
1.0,
0.47528,
0.36154,
0.34543,
0.34543,
0.34201,
0.32933,
0.31845,
0.31467,
0.3084,
0.30794,
0.28188,
0.27151,
0.27072,
0.2599,
0.2599,
0.24828,
0.24735,
0.24662,
0.24616,
0.23899,
0.23136,
0.23029,
0.22962,
0.22774,
0.22173,
0.21856,
0.21693
],
"PROP": [
"phylum",
"chemblID",
"geneID",
"<-compoundID{typeOf:ChemicalCompoundGeneticVariantAssociation}->variantID",
"<-variantID{typeOf:ChemicalCompoundGeneticVariantAssociation}->compoundID",
"virusGenus",
"typeOfGene",
"fullName",
"ensemblID",
"simplifiedMolecularInputLineEntrySystem",
"geneticVariantFunctionalCategory",
"chromosomeSize",
"virusHost",
"strandOrientation",
"<-geneID{typeOf:GeneGeneticVariantAssociation}->variantID",
"<-variantID{typeOf:GeneGeneticVariantAssociation}->geneID",
"ncbiProteinAccessionNumber",
"hgncID",
"alleleType",
"ofVirusSpecies",
"hasGenomicCoordinates",
"ncbiTaxId",
"umlsConceptUniqueID",
"antigenType",
"alleleOrigin",
"<-diseaseID{typeOf:DiseaseGeneAssociation}->geneID",
"antibodyType",
"inChIKey"
]
"CosineScore": [],
"PROP": []
},
"query_detection_debug_logs": {
"dc_recognize_entities": {
"volvox": [
"bio/D044446",
"bio/Volvox"
]
},
"dc_recognize_entities": {},
"dc_recognize_places": {},
"llm_response": {},
"main_place_inferred": null,
"original_query": "What is the phylum of volvox",
"place_dcid_inference": "Place DCID Inference did not trigger (no place strings found).",
"place_resolution": "Place resolution did not trigger (no place dcids found).",
"places_found_str": [],
"query_transformations": {
"place_detection_input": "What is the phylum of volvox",
"place_detection_with_places_removed": "what is the phylum of",
"sv_detection_query_index_types": [
"medium_ft",
"bio_ft"
],
"sv_detection_query_input": "what is the phylum of",
"sv_detection_query_stop_words_removal": "phylum"
]
}
}
}
1,374 changes: 11 additions & 1,363 deletions ...n_tests/test_data/detection_api_bio/whattypesofgenesarefgfr1,apoe,andache/debug_info.json
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7 changes: 7 additions & 0 deletions ...t_data/e2e_edge_cases2/povertyvs.unemploymentrateindistrictsoftamilnadu/chart_config.json
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Original file line number Diff line number Diff line change
Expand Up @@ -106,6 +106,13 @@
],
"peerPlaces": [],
"peerTopics": [
{
"dcid": "dc/topic/EconomicActivity",
"name": "Economic Activity",
"types": [
"Topic"
]
},
{
"dcid": "dc/topic/GlobalEconomicActivity",
"name": "Global Economic Activity",
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8 changes: 4 additions & 4 deletions .../integration_tests/test_data/e2e_electrification_demo/howhasthegdpgrown/chart_config.json
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Expand Up @@ -377,23 +377,23 @@
{
"tiles": [
{
"placeDcidOverride": "country/RWA",
"placeDcidOverride": "country/ETH",
"statVarKey": [
"Amount_EconomicActivity_GrossDomesticProduction_Nominal_growth_pc"
],
"title": "Rwanda",
"title": "Ethiopia",
"type": "LINE"
}
]
},
{
"tiles": [
{
"placeDcidOverride": "country/ETH",
"placeDcidOverride": "country/RWA",
"statVarKey": [
"Amount_EconomicActivity_GrossDomesticProduction_Nominal_growth_pc"
],
"title": "Ethiopia",
"title": "Rwanda",
"type": "LINE"
}
]
Expand Down
67 changes: 7 additions & 60 deletions server/integration_tests/test_data/e2e_triple/howaboutforpqlc3/chart_config.json
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@@ -1,68 +1,15 @@
{
"client": "test_detect-and-fulfill",
"config": {
"categories": [
{
"blocks": [
{
"columns": [
{
"tiles": [
{
"answerTableTileSpec": {
"columns": [
{
"header": "Has Genomic Coordinates",
"propertyExpr": "->hasGenomicCoordinates"
}
]
},
"entities": [
"bio/ncbi_109457387",
"bio/ncbi_421941"
],
"title": "The Has Genomic Coordinates for PQLC3 are as follows:",
"type": "ANSWER_TABLE"
}
]
}
]
}
]
}
]
},
"config": {},
"context": {},
"debug": {},
"entities": [
{
"dcid": "bio/ncbi_109457387",
"name": "PQLC3",
"type": ""
},
{
"dcid": "bio/ncbi_421941",
"name": "PQLC3",
"type": ""
}
],
"pastSourceContext": "",
"place": {},
"placeFallback": {},
"placeSource": "UNKNOWN",
"places": [],
"relatedThings": {
"childPlaces": {},
"childTopics": [],
"exploreMore": {},
"mainTopics": [],
"parentPlaces": [],
"parentTopics": [],
"peerPlaces": [],
"peerTopics": []
"failure": "Sorry, could not complete your request. No entity found in the query.",
"place": {
"dcid": "",
"name": "",
"place_type": ""
},
"svSource": "UNKNOWN",
"userMessages": [
"See relevant information based on the previous query."
"Sorry, could not complete your request. No entity found in the query."
]
}
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